Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02556 ATGGTGGTGCTGTACATGAAGAGATTTCTTTTGTCATCTGACTTGCATAGTATTAAACAGTCAAAAACCTTTTACTGGGGTTTAAGGAAGGAGAGCGAAGAGTGTGTGTGTCCACTGCAGAGGAAAAGAATGAGTTTGGTGGCTGGTTCGTACGAGAAATTCATCTGGGGTCTCACCCTAAAGCCCCAATCCCAATCTCTAACCCCTCTCTTCTCCTACCCTTCCCACCTCTCCTCCATCAAAACCGTCTCCGTCTCCGGCTCCGTCGTCGCCTCCGGTGGCGACGACGACACCATTCACCTCTACGACCTCTCCACCGCCTCCTCCCTCGGTTCCCTCCACCAACACTCCGCCTCCGTCACTGCCCTCTCTTTCTACGCTCCTCCCAACCTCCCCTTCCCCCGCAACCTCATCTCCGCCGACGCCTCTGGCTCCCTCTCCATATTCGATGCCGACGGCTTCGTCCACCTCACCACGCTCTCCGTCCACCGCAACTCCGCCATCAACGACCTCGCCCTGCACCCCTCCGGCGAGCGCGCCCTAACCGTCGCCCGCGACAACTGCCTCGCCGTCGTCAACCTCGTCCGCGGCCGCCGCAACTGCTGCTTGCGCCTCGACAAGGAGGCTACTCTGGTCAAGTTCAATGCCTCCGGCGACCACTTTTTCATGGCCACGAAGGAGAAAGTGTCTGTCCACCAGACCGAGGATGCACGGATATTGTTCGATATGGAATGCTCCAAGCCCGTTCTCTGCGCTGCTCCTGCTAGGAACGGACTTCTTTACACTGGTGGGGAGGACAAAAGTATCATTGCATGGGATATAAAGACTGGAAAAGTTGCATATTGCTTGGAAGACGCACATACTTCCCGTGTCAAAGGTATTGTTGTGCTCACGGATGCTGATGGTGCTACAGGGGATGATGACCCTTACCTAGTGGCATCTGCATCATCTGATGGCAATATACGTGTCTGGGATGTTCGAATGGCGGTCAGAGAGAAACCACTAGCTGAATATAACACACGGTCAAGATTGACATGCCTTGCTGGAACAAGTCTGAGATTCCGAAGGCAAAGGCCCCAGGATGGGAGTAAATCAAAGATAGTGAAACGACAAAGAGTGGAGACTGGAAAGAAAGGAAAGGTAGATGATGAAACCATAGAAGGTTAA 1167 0.5364 MVVLYMKRFLLSSDLHSIKQSKTFYWGLRKESEECVCPLQRKRMSLVAGSYEKFIWGLTLKPQSQSLTPLFSYPSHLSSIKTVSVSGSVVASGGDDDTIHLYDLSTASSLGSLHQHSASVTALSFYAPPNLPFPRNLISADASGSLSIFDADGFVHLTTLSVHRNSAINDLALHPSGERALTVARDNCLAVVNLVRGRRNCCLRLDKEATLVKFNASGDHFFMATKEKVSVHQTEDARILFDMECSKPVLCAAPARNGLLYTGGEDKSIIAWDIKTGKVAYCLEDAHTSRVKGIVVLTDADGATGDDDPYLVASASSDGNIRVWDVRMAVREKPLAEYNTRSRLTCLAGTSLRFRRQRPQDGSKSKIVKRQRVETGKKGKVDDETIEG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02556 388 SUPERFAMILY WD40 repeat-like 46 327 IPR036322 GO:0005515
Phco7g02556 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 112 IPR001680 GO:0005515
Phco7g02556 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 311 327 IPR001680 GO:0005515
Phco7g02556 388 Gene3D - 19 244 IPR015943 GO:0005515
Phco7g02556 388 Gene3D - 245 367 IPR015943 GO:0005515
Phco7g02556 388 SMART WD40_4 153 193 IPR001680 GO:0005515
Phco7g02556 388 SMART WD40_4 66 103 IPR001680 GO:0005515
Phco7g02556 388 SMART WD40_4 276 325 IPR001680 GO:0005515
Phco7g02556 388 SMART WD40_4 236 273 IPR001680 GO:0005515
Phco7g02556 388 SMART WD40_4 106 150 IPR001680 GO:0005515
Phco7g02556 388 Pfam WD domain, G-beta repeat 69 103 IPR001680 GO:0005515
Phco7g02556 388 Pfam WD domain, G-beta repeat 286 325 IPR001680 GO:0005515
Phco7g02556 388 ProSitePatterns Trp-Asp (WD) repeats signature. 312 326 IPR019775 -
Phco7g02556 388 PANTHER PAK1 INTERACTING PROTEIN 1 44 379 - -
Phco7g02556 388 MobiDBLite consensus disorder prediction 357 388 - -
Phco7g02556 388 MobiDBLite consensus disorder prediction 356 388 - -
Phco7g02556 388 PRINTS G protein beta WD-40 repeat signature 90 104 IPR020472 -
Phco7g02556 388 PRINTS G protein beta WD-40 repeat signature 260 274 IPR020472 -
Phco7g02556 388 PRINTS G protein beta WD-40 repeat signature 312 326 IPR020472 -