Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02535 ATGACGTCACGGTCGGGTCAGGGCAGCAGCGGCAGCAGTAGGACCCGTGTGGGGAAGTACGAGTTGGGTCGGACCCTGGGCGAGGGCAATTTCGCCAAGGTAAAGTTCGCTAGGCACGTGGAAAGCGGAGAGAACGTCGCCATCAAGATTCTCGACAAGGAGAAACTTCTCAAGCACAAGATGATTGACCAGATAAAACGAGAAATATCAACAATGAAACTTATTAGACACCCAAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTCGTGACTGGTGGAGAGTTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGATGGAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTACTGCCATAGTAGAGGTGTTTTTCATAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGTTATGATGGTGCAAAGGCAGATCTATGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCAGGCTATCTGCCCTTTGAAGAAACCAATCTAACGGCTTTATATAAAAAGATTTACAAGGCTGAGTTTACGAGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAGAATACTTGATCCAAATCCTGCCACTAGGATTACAATTGCTGAGGTCATTGAGAATGATTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGCTAGTGTTAGTCTTGATGATGTAAATTCTATTTTCAGCGAATCTTTGGATTCGCAAAATCTTGTAGTTGAGAGGCGTGAAGAGGGGCATGCGGCACCAGTGACAATGAATGCCTTTGAGCTTATATCTAAATCTCAAGGTCTCAACCTTAGTAGTCTATTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACACGATTCACGTCCAAATGTTCAGCAGATGAAATAATTTCAAAAATTGAGAAAGCAGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTAGAGGTAGCCCCTTCGCTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTTGCTACTGGGCTGAAAGATATTGTTTGGAAAGCAGAGCCTATCGATGAAGGAAAACATGATGCCAATCCATCAAAATAA 1374 0.4214 MTSRSGQGSSGSSRTRVGKYELGRTLGEGNFAKVKFARHVESGENVAIKILDKEKLLKHKMIDQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDGARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLTALYKKIYKAEFTSPPWFSSSAKKLINRILDPNPATRITIAEVIENDWFKKGYKPPVFEQASVSLDDVNSIFSESLDSQNLVVERREEGHAAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEKAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIDEGKHDANPSK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02535 457 Gene3D Kinase associated domain 1, KA1 317 442 - -
Phco7g02535 457 CDD STKc_SnRK3 19 274 - -
Phco7g02535 457 FunFam Non-specific serine/threonine protein kinase 316 442 - -
Phco7g02535 457 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Phco7g02535 457 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02535 457 Gene3D Transferase(Phosphotransferase) domain 1 100 282 - -
Phco7g02535 457 FunFam Non-specific serine/threonine protein kinase 13 316 - -
Phco7g02535 457 CDD CIPK_C 323 438 - -
Phco7g02535 457 Gene3D Phosphorylase Kinase; domain 1 9 99 - -
Phco7g02535 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Phco7g02535 457 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Phco7g02535 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 427 - -
Phco7g02535 457 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02535 457 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Phco7g02535 457 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02535 457 SUPERFAMILY Protein kinase-like (PK-like) 17 299 IPR011009 -
Phco7g02535 457 Pfam NAF domain 319 379 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02535 Phco-Chr7 44164935 44173189 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco7g02535 Pkinase 2.4e-74 CL0016