Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02507 ATGTGTGTACAGGATGCAGAGAAAGATAAGGATAACACCTCAACAAATTCATGGCCTTTGCATTGTCACCTTTTGCTGGCCTCCCACATGGACAAAAAAAGATATTTTTTCACACCTTCAACTCATGACACCACAAATATCACTGTTCAAAGTTCCATTCCTCTAGAAAGCATTTATGAGGACGCGGTGATTGCAGACAAGAAACAGAATCAGATGAATTTAGCCCCGGCTCTTCGGTCTGGAGAGTGGTCTGACATAGGAGAACGCCCTTACATGGAGGACACTCACATATGCATTGGAGACTTGGCAAAGAAATTTAATTATAATGCACTTTCTGGGGAAGCTGTTTCCTTTTATGGCGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTACGAGATAATCTGCCAAGATTTATTGTTGAGGATGTTAACTTTCCTTTGGAGCTTGAGAAGGTGGTCAAAAGGTCATTTTTGGAGACTGACGCTGCATTTCTAAAAACATCCTCTCAAGAGCCTTCCCTTTCTTCTGGTACAACTGCTTTAACTGCAATTATATTTGGAAGGTCTTTACTTGTAGCTAATGTGGGAGACTGTCGAGCTGTCTTGTCCCACCATGGAAGAGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGTGTCAATGAAAGGACACGGGTTGAGTCCCTAGGAGGCTTCGTTGACGATGGTTACCTGAATGGCCAGTTAGGTATCACTCGCGCTATTGGAGACTGGCACCTTGAAGGAATGAAGGGAACGAGTGAAAGAGGAGGACCACTGATTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGAATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGGAGGAGGCTTCAAGAGCACAACGATGAGAAACTGTGCTGCAAGGAAATGGTGCAGGAAGCAATCAAGAGAGAATCAACTGATAACTTGACAGTTGTGATGGTATGTTTTAACTCAGATCCTCCAACACCTGTGGTTGTGGAAAGAACACGAGTAAGAAGAAGCATATCTGCAGAAGGACTTCAGAATCTTAAATGCCTGCTAAAAGAGTAA 1134 0.4242 MCVQDAEKDKDNTSTNSWPLHCHLLLASHMDKKRYFFTPSTHDTTNITVQSSIPLESIYEDAVIADKKQNQMNLAPALRSGEWSDIGERPYMEDTHICIGDLAKKFNYNALSGEAVSFYGVFDGHGGKSAAQFVRDNLPRFIVEDVNFPLELEKVVKRSFLETDAAFLKTSSQEPSLSSGTTALTAIIFGRSLLVANVGDCRAVLSHHGRAIEMSKDHRPNCVNERTRVESLGGFVDDGYLNGQLGITRAIGDWHLEGMKGTSERGGPLIAEPELKLMTLTKEDEFLIIASDGIWDVFSSQNAVDFARRRLQEHNDEKLCCKEMVQEAIKRESTDNLTVVMVCFNSDPPTPVVVERTRVRRSISAEGLQNLKCLLKE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02507 377 PANTHER PROTEIN PHOSPHATASE 2C 66 342 IPR015655 GO:0004722|GO:0006470
Phco7g02507 377 Pfam Protein phosphatase 2C 91 336 IPR001932 -
Phco7g02507 377 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Phco7g02507 377 SMART PP2C_4 69 342 IPR001932 -
Phco7g02507 377 FunFam Probable protein phosphatase 2C 22 64 347 - -
Phco7g02507 377 CDD PP2Cc 79 344 IPR001932 -
Phco7g02507 377 SUPERFAMILY PP2C-like 74 346 IPR036457 -
Phco7g02507 377 Gene3D - 60 348 IPR036457 -
Phco7g02507 377 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02507 Phco-Chr7 43882429 43885503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Phco7g02507 PP2C 3.9e-68 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02507 7 43882429 43885503 Phco7g02507 7 43882429 43885503 ECH
Phco8g01214 8 12704526 12707392 Phco7g02507 7 43882429 43885503 PCT