Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02497 ATGGAAAAGAGTATATACACTTTTCTCACTGTGCATCGTTGGGAGTCACTGAACGGTATGAAATATAGATTGGCTTCCCTTAGGCCTGTTCATGGAAGGTTGGCTCTGAAATTTCTCAATTGGGTCATAAAGCAACCCAATTTAGAGCTCAAACATGTTACTCATATTATCTGCACTACTACCCACATACTTGTTAGAGCTAGAATGTACAACTTTGCCAAAACAACCTTAAAGCATATGCTACAACTGCCTATTGGTTTGAATTCTGTCTTTTGTGCTTTGATGGAGACATACCCCATTTGCAACTCAAACCCAGCTGTTTTTGACCTCCTGATTAGGGTTTGTTTGAGGGACAAGATGGTTGGAGATGCTGTGCAGACTTTCTACTTAATGGGGTTTCGGGGACTGAAGCCGTCTGTATATACTTGTAACATGGTGTTAGGTTCACTTGTGAAGGAGCAGAAAGTTGATATGTTTTGGTCCTTTTTCAAAGAGATGCTTACCAAAGGGATTTGTCCTAATGTTGCTACATTCAACATATTGTTGAATGCGTTGTGTCAACGGGGGAAGTTTAAAAGTGCTGGCTTTCTCTTGAGGAAAATGGAAGAAAGTGGTGTTTATCCGACTGCCGCCACATACAATACCTTGCTTAATTGGTATTGCAAGAAAGGAAGGTACAAAGCAGCATCTAAGTTGATTGACTCCATGACATCTAAGGGTATTGCGGCAGATGTTTGTACATATAATGTTTTGATCGGGAATTTGTGCAAGGAAGGCAGGAGTGCAAAAGGTTATTTACTGTTGAAAAGGATGAGAAGGAATATGGTGGATCCTAATGAGATAACTTATAATTCTCTTATTAATGGATTTGTTAAGGAGGGGAAAATTGCAGTTGCTGCAAAAGTTTTTGATGAGATGTCATCATTTAATTTGTTACCCAACATTATCACTTACAATACTTTGATTGCTGCGCACTGTAGGACGGGCAACAATGGGGAGGCATTGAGACTGATGGATGTTATGGTATCATGTGGTTTAAGACCTAATGAAGTTACATATGGAGCTCTTTTGAATGGGCTATCCAAGCATGCTGAATTTGGATTGGTTTCTAGTATTCTTGAGAGAATGAGGATGGATGGGGTGGGAGTTGGTCATATTAGTTACTCAGCAATGATTGATGGATTGTGCAAGAATGGCAGGCTTGAAGAAGCTGTGCAATTGTTGGATGATATGTTAAAAATTTCTGTTAGTCCTGATGTTGTTACATTTTCGGTGCTCATAAATGGATTTTTCAGGGTGGGGAAGATAAATAATGCAAAGGAGATTATGTGTAAGATGTATATGACTGGACTTGTGCCAAATAGCATTTTGTATTCAACATTAATATACAATTATTGCAAAATGGGATACTTAAAAGAGGCATTAAATGCTTATGCAATTATGAATCATAGTGGTTATGCTGCTGATCACTTTACATGTAATGTGTTGGTTGCTGCTTTCTGTAGATGTGGAAGACTTGAAGAGGCTGAGTATTTTATGGAACACATGAACAGAATTGGTCTGGATCCTAACTCCATTACTTTTGATTGTGTTATAAATAGTTACGGAAATTCTGGTGATGCATTAAAAGCTTTTTATATGCTCGATAAAATGAATTGGTTAGGTCATTTGCCCAGTCAATTCACGTATGGGGCTTTATTGAAAGCACTTTGCATAAGTGGACATATAAATGAAGCCTGGAAGCTTTTCCGTAGACTTTGTTCTGTTCCTAATGCTGTCGATAATGTTATCTTCAACACAATGCTTACTTCTATTTGTAGATCAGGAAATTTATCCGATGCAGTTGCCCTAATTAATGAGATGGTTACAAATGATTTTCTGCCTGACAATTTAACATACACTAATCTTATTACGGGGCTATGCAAGAAGGGTAAAATAGTTGCAGCACTCCTTTTGTCAGGAAAGGCAATTGAAAAAAGATTATTATCTCCAAATCCTGCCGTATACACCAGCTTAGTCTATGGTCTTCTTAAGCGTGGACATTCAAGAGCAGCTTTGTTTATTTTTGAAGAAATGCTAAGCAAAGGAGTGGAGCCTGATACTATAACATTCAATGTGATTATAGATCAATACTTAAGGAGAGGGAGAACGTCGGAGGTCAATGATATTCTTTCAACAATGAAAAGTAAAAATGTATGCTTCAATTTGGCTACTTACAACATCCTACTACATGCACATGCAAAGAGGAATGCAATGACAAGATGTTTAATGTTATACAAAGACATGATCAGAAACGGTTTTCTACCAGATAAGTATTCATGGAACTCTCTTATTCTTGGGTATTGTAGGTCCAAATCATTTGATGTTGCTATTAAAATTTTAAGATGGATAACACTGAAAGGTTTCATAACGGATTGCTCTACATTTAACATGCTTATGTCCAAGTTCTGTGAAAGGAATGAGATGAAAATGGCCTATGATCTGTTAAATCACATGAATCAGTTTACAATAATTCCTAATGTAGATACATACAATGCCCTTTTTAATGGACTCATTAGAACTAGTGATTTTGATAAAGCTCATCATGTTTTGCAAGCCTTGTTGGAAAGTGGTTCTGTTCCTACGAGTAAACAATATATTACTTTAATCAATGGTATGTGTAGAGTTGGGAACATAAAAGGAGCATTGAAACTTCAAGATGAAATGAAAACACATGGTGTCAGCTCCCACAATGTTGCAATGAGTGCTACTGTTAGAGGGCTTGCACATTCAAAGAAGACAGAAAATGCTATTTGGGTTCTTGATTTGATGCTTGAGACGCAAGTCATTCCAACTGTTGCTACTTTCACTACATTAATGCACGTCTATTGCAAAGAAGCTAATGTTGCAAAAGCTTTAGAATTGAGGAGCACGATGGAACATTGTCATTTGAAGCTTGATGTTGTTGCGTATAATGTTCTTATATCTGGCCTTTGTGCTAATGGAGATATTGAAGCAGCTTTTAAACTTTATGAAGAGATGAAACAAAGAAATCTTTGGCCTAATACCTCTATTTACATTGTTCTTATTGATTCTCTCTGTGATGGAAATTATCATACTCAAAGTGAAAAACTTTTGAGGGACATACAAGCCAGGGGACTGGTTTCTTTTAATTCATATGGAGGAACCAAAAGATTGAATGAGTTATTGATTATTGCTAGGAAAAAAATAATTCATTTGAGGTACAAAATGAGAAGAAATTTTGGTTGA 3249 0.3672 MEKSIYTFLTVHRWESLNGMKYRLASLRPVHGRLALKFLNWVIKQPNLELKHVTHIICTTTHILVRARMYNFAKTTLKHMLQLPIGLNSVFCALMETYPICNSNPAVFDLLIRVCLRDKMVGDAVQTFYLMGFRGLKPSVYTCNMVLGSLVKEQKVDMFWSFFKEMLTKGICPNVATFNILLNALCQRGKFKSAGFLLRKMEESGVYPTAATYNTLLNWYCKKGRYKAASKLIDSMTSKGIAADVCTYNVLIGNLCKEGRSAKGYLLLKRMRRNMVDPNEITYNSLINGFVKEGKIAVAAKVFDEMSSFNLLPNIITYNTLIAAHCRTGNNGEALRLMDVMVSCGLRPNEVTYGALLNGLSKHAEFGLVSSILERMRMDGVGVGHISYSAMIDGLCKNGRLEEAVQLLDDMLKISVSPDVVTFSVLINGFFRVGKINNAKEIMCKMYMTGLVPNSILYSTLIYNYCKMGYLKEALNAYAIMNHSGYAADHFTCNVLVAAFCRCGRLEEAEYFMEHMNRIGLDPNSITFDCVINSYGNSGDALKAFYMLDKMNWLGHLPSQFTYGALLKALCISGHINEAWKLFRRLCSVPNAVDNVIFNTMLTSICRSGNLSDAVALINEMVTNDFLPDNLTYTNLITGLCKKGKIVAALLLSGKAIEKRLLSPNPAVYTSLVYGLLKRGHSRAALFIFEEMLSKGVEPDTITFNVIIDQYLRRGRTSEVNDILSTMKSKNVCFNLATYNILLHAHAKRNAMTRCLMLYKDMIRNGFLPDKYSWNSLILGYCRSKSFDVAIKILRWITLKGFITDCSTFNMLMSKFCERNEMKMAYDLLNHMNQFTIIPNVDTYNALFNGLIRTSDFDKAHHVLQALLESGSVPTSKQYITLINGMCRVGNIKGALKLQDEMKTHGVSSHNVAMSATVRGLAHSKKTENAIWVLDLMLETQVIPTVATFTTLMHVYCKEANVAKALELRSTMEHCHLKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRNLWPNTSIYIVLIDSLCDGNYHTQSEKLLRDIQARGLVSFNSYGGTKRLNELLIIARKKIIHLRYKMRRNFG 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 655 730 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 587 654 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 310 373 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 237 309 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 24 168 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 169 236 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 830 907 IPR011990 GO:0005515
Phco7g02497 1082 SUPERFAMILY HCP-like 464 700 - -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 805 839 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 464 576 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 731 824 IPR011990 GO:0005515
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 559 589 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 561 587 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 421 454 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 948 980 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 141 175 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 668 701 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 843 875 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 491 518 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 177 209 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 316 350 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 702 735 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 596 629 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 386 419 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 246 279 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 738 770 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 212 244 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 281 314 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 982 1012 IPR002885 -
Phco7g02497 1082 NCBIfam pentatricopeptide repeat 879 908 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 735 769 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 314 348 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 419 453 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 244 278 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat 450 475 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat 275 307 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat 555 585 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat 943 973 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat 871 903 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 139 173 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 945 979 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 770 804 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 104 138 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 875 909 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 665 699 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 594 642 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 664 709 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 313 362 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 138 187 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 208 257 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 807 852 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 489 535 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 386 431 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 980 1028 IPR002885 -
Phco7g02497 1082 Pfam PPR repeat family 735 783 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 700 734 IPR002885 -
Phco7g02497 1082 PANTHER ATPASE EXPRESSION PROTEIN 3 594 941 - -
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 374 462 IPR011990 GO:0005515
Phco7g02497 1082 Gene3D Tetratricopeptide repeat domain 923 1058 IPR011990 GO:0005515
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 279 313 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 384 418 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 594 628 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 840 874 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 980 1014 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
Phco7g02497 1082 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -