Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02478 ATGCAGCAGGCTGATTCAACGGTTCTAAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGCAGGCTTTTTGCTCTCTCCTCCTCCTCTTTCCCTCCCTCCGCCGATCTCCCTCTCACGCGCCCCCATGCGTCTTTCTCTCTCAAGACCGGAGATTCACGTTTCGAGGTTCGTGAACGTGTGCAATATACCAGAGATAAGCTTTTACAGCTTCAAGAGGTTATTGTTGACGTCCCTGATGATATTCTGAAAATTAAGCAAGATATAGAAGCTGAACTTTTTGGTGAAAATCAAAGTTGGGGAGGACGTGCTGATAGCAATCCTCCTCATCAACTACAAAATCGGTATCCTGAGACAGATAATCGTGATTGGCGTGGTCGTTCTGGACAACTTCCTGCTAGTCCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGTAGTCAATTTTCAAGGACACAAATGTCTTCTACCCAAGGGGGAGGACCTACTCCTACACTAACCAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAACAAGTTAACGCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCCGCTGACATCTTGAAGGATGTCATTTCACTTATTTTTGACAAGGCTGTTCTAGAACCAACATTTTGCCCAATGTATGCTCTGCTGTGTTCTGATCTGAATGAAAAACTGCCTCCATTCCCATCTGGGGAACCTGATGGGAAGGAAATCACCTTTAAGAAATTATTATTGAATAATTGCCAGGAGGCATTTGAAGGTGTGGAACTAAAAAGGATGGCTGTCCCTGAGCAGGAGACGGAGCGAATGGACAAGGAAAGACTGCTCAAGCTTCGGACTCTTGGAAATATTCGTTTAATTGGTGAGCTATTGAAGCAAAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGATCCCCAGGCAGCAAGTCTTGTCCTGTTGAGGAAAATGTGGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCACGGCGTATAAATGATATGTACTTTAGTCGATTGAAAGAATTGAGCTCAAATCTACAACTTGTACCCCGGCTTAGGTTCATGATTCGAGATGTTCTAGATTTACGTGCTAGTAACTGGGTTCCTAGACGGGAAGAGATCAAAGCCAAAACTATTACTGAAATTCATTCGGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAATATGAGAAATACCCGTGGTGGTGTTCACGGAAATTTCAGCCCTGGGGGCTTCCCTATTTCCCGACCTGGTACAGGTGGTCTGATGCCTGGAATGCCAGGGAGCAGAAAGATGCCTGGGATGCCTGGATTTGATAATAGCAACTGGGAGATGCCTAAGACTAGATCTATGCCAAGAGGAGACTTCTCAGGTGTTCAAGCTGCAGGGTCCAACAGCCCTTTACTTTCCAAGCCCACAATCCTTAATTCAAAATTGCTACCTCAAGGAAGTAGTGGTATTGTAAGTGGAAGAAATAGTGCCCTAGTACATGGAGCTGCTACATTTTCTGCTCGATCGACAAACTATGTTTTAGGTCCTGAGACAGCACCTCAGCTCTCTTCACATGATAGAACTGTTGCTCCTGCTCCTGTATCCTCTGAGAAGTCACAGGCACCAGACGGTGGATTGAATACTGATGATCTTCGACGCAGAACTATCTCTCTTCTACAAGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAATTGAAATCTCCTTCTTTTTACCCTGAGGTTGTTAAGGAAGCCATTTACCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAATCTCATGGAGTATCTATACATTAAGAAGATTCTTACTGCTATAGATATCGAGGCTGGCTGTTTGTTATTCGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAATCACCTAGTAATTTTGGTGTGATTATTGGGAAACTAATTTTGGCTGGGGGATTAAATTTTAAGGTGGCGAGAGAGATTCTCAAGAAGGTGGAAGATGACATGTTCCAGAGAGAAATATTTGACAGTGCGATAGGGACCATTAAATCTGCTGCATCCGGACAAGCAGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 2283 0.4428 MQQADSTVLSLRPGGGRGGGSRLFALSSSSFPPSADLPLTRPHASFSLKTGDSRFEVRERVQYTRDKLLQLQEVIVDVPDDILKIKQDIEAELFGENQSWGGRADSNPPHQLQNRYPETDNRDWRGRSGQLPASPDERSWENLRDNSSQFSRTQMSSTQGGGPTPTLTKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSGEPDGKEITFKKLLLNNCQEAFEGVELKRMAVPEQETERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPGSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSSNLQLVPRLRFMIRDVLDLRASNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANMRNTRGGVHGNFSPGGFPISRPGTGGLMPGMPGSRKMPGMPGFDNSNWEMPKTRSMPRGDFSGVQAAGSNSPLLSKPTILNSKLLPQGSSGIVSGRNSALVHGAATFSARSTNYVLGPETAPQLSSHDRTVAPAPVSSEKSQAPDGGLNTDDLRRRTISLLQEYFSVRLLDEALQCVEELKSPSFYPEVVKEAIYLALDKSPPCVEPVANLMEYLYIKKILTAIDIEAGCLLFGSLLDDIGIDLPKSPSNFGVIIGKLILAGGLNFKVAREILKKVEDDMFQREIFDSAIGTIKSAASGQAVLDLQTSDIKACQSLLK 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02478 760 ProSiteProfiles MI domain profile. 594 716 IPR003891 -
Phco7g02478 760 MobiDBLite consensus disorder prediction 560 591 - -
Phco7g02478 760 MobiDBLite consensus disorder prediction 97 169 - -
Phco7g02478 760 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 53 753 IPR045208 GO:0003743
Phco7g02478 760 MobiDBLite consensus disorder prediction 100 115 - -
Phco7g02478 760 MobiDBLite consensus disorder prediction 560 587 - -
Phco7g02478 760 Pfam MA3 domain 595 706 IPR003891 -
Phco7g02478 760 SMART if4_15 188 409 IPR003890 GO:0003723|GO:0005515
Phco7g02478 760 Gene3D - 179 410 - -
Phco7g02478 760 Pfam MIF4G domain 188 409 IPR003890 GO:0003723|GO:0005515
Phco7g02478 760 SMART ma3_7 595 707 IPR003891 -
Phco7g02478 760 Gene3D - 589 758 - -
Phco7g02478 760 SUPERFAMILY ARM repeat 588 745 IPR016024 -
Phco7g02478 760 SUPERFAMILY ARM repeat 182 412 IPR016024 -
Phco7g02478 760 FunFam Eukaryotic translation initiation factor isoform 4G-2 179 410 - -
Phco7g02478 760 MobiDBLite consensus disorder prediction 144 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02478 Phco-Chr7 43562127 43567600 Dispersed