Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02470 ATGATGGGTGAGAAAAGCAGCACCGGCGAGGCTAATAACTCCATGCTGCTACACGGGAAGTACGAGCTAGGGCGGTTACTGGGGCACGGAACCTTCGCCAAGGTGTACCACGCAAGGAACCTCAAGAGCGGAAAGAACGTGGCCATGAAGGTGGTGGGGAAGGAGAAAGTGATGAAGGTGGGGATGATGGAGCAGATAAAAAGGGAGATCTCGGCCATGAACATGGTGAAGCACCCCAGCATCGTGCAGCTCCACGAGGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTTTTTAACAAGATCGCCCGCGGCCGCCTCAGAGAGGAGACGGCGCGCCTCTACTTCCAGCAGCTCGTCTCCGCCGTCGACTTCTGCCACAGCCGTGGCGTCTACCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGGACGGCAACCTAAAAGTCACCGACTTCGGCCTCAGCACCTTCTCCGAACACCTCCGCCAGGACGGCCTGCTTCACACCACGTGCGGCACACCGGCCTACGTGGCGCCGGAGGTCATCGGGAAAAAAGGCTACGACGGCGCCAAAGCTGATATCTGGTCTTGCGGTGTAATCCTCTATGTTCTCCTCGCAGGATTTTTACCCTTCCAGGATGACAACTTGGTCTCCTTGTATAAGAAAATTTACCGCGGTGACTTCAAGTGCCCGCCGTGGTTTTCATCCGAAGCACGCCGCCTCATCACAAAGCTTCTCGACCCGAACCCGAATAGTCGAATAACGATTTCGAAGATCATGGAGTCGTCCTGGTTTAAGAAACCGGTTCCGAAGAACATTATGGGAGTGAAGAGAGAGGAGTTGGATTTGGAGGAGAAGATTAAGCAGCAGGAAGAATGTAAGTCTAGCACGATGAATGCTTTTCATATAATTTCGCTTTCGGAGGGTTTCGATTTGTCGCCCTTGTTCGAGGAGAAAAAGAGGGAGGAGAAGGAGATTCGTTTTGCGACCACACGCTCCGCAAGCAGCGTGATTTCGCGGCTGGAGGAGGTGGCGAAGGCGGTGAAGTTTGACGTTAAGAAAAGTGAGAGCAAAGTGAGGTTGCAGGGTCAAGAGCGGGGTCGGAAAGGGAAGCTTGCAATTGCTGCAGATTTATACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGACAACGGTGACACCTTAGAGTACAACCAGTTCTGCAGCAACCAACTTCGTCCTGCGCTTAAAGACATCGTCTGGAGGACTTCCCCTCCTGAGAATCCTACACCTGCTTGA 1317 0.5429 MMGEKSSTGEANNSMLLHGKYELGRLLGHGTFAKVYHARNLKSGKNVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPSIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLVSAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVSLYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRITISKIMESSWFKKPVPKNIMGVKREELDLEEKIKQQEECKSSTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRSASSVISRLEEVAKAVKFDVKKSESKVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNQLRPALKDIVWRTSPPENPTPA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02470 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 423 - -
Phco7g02470 438 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Phco7g02470 438 CDD STKc_SnRK3 20 274 - -
Phco7g02470 438 Gene3D Transferase(Phosphotransferase) domain 1 103 280 - -
Phco7g02470 438 FunFam Non-specific serine/threonine protein kinase 303 427 - -
Phco7g02470 438 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02470 438 Pfam NAF domain 306 364 IPR004041 GO:0007165
Phco7g02470 438 SUPERFAMILY Protein kinase-like (PK-like) 18 276 IPR011009 -
Phco7g02470 438 CDD CIPK_C 309 423 - -
Phco7g02470 438 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Phco7g02470 438 Gene3D Kinase associated domain 1, KA1 303 428 - -
Phco7g02470 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Phco7g02470 438 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02470 438 FunFam Non-specific serine/threonine protein kinase 11 307 - -
Phco7g02470 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Phco7g02470 438 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02470 438 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02470 Phco-Chr7 43442091 43443407 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco7g02470 Pkinase 5.6e-74 CL0016