Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02444 ATGGGAATCCCTGGATTGAGCAATCAGAATAATGGGCAGCAAAGATTAGGCATAACTGAGCCTATTTCATTGGCTGGACCAACTGAGGATGATGTGATCAAGACGCGTGAACTTGAGAAGTACTTGCAAGGTGTTGGATTGTACGAGAGTCAGGAGGAGGCTGTGGGTAGGGAGGAAATTCTTGGCAGGCTGGACCAGATTGTGAAGATTTGGGTTAAGAACATCAGCCGAGGAAAGGGGTTCAATGAACAACTGGTGCAAGAAGCAAATGCCAAGATTTTTACCTTTGGCTCTTATCGGTTGGGGGTGCATGGCCCTGGAGCTGATATAGATACTCTTTGTGTGGGACCTAGACATGCAACCAGAGATGAAGATTTCTTTGGTGAGCTATGGAAGATGCTATCTGAGATGCAAGAAGTAACAGAGTTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAATTTCTGTTGATCTCCTGTATGCAAGATTAGCTTTGTGGGTTATTCCTGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTTGACGAACAAACTGTTCGTAGTCTTAATGGTTGTAGAGTAACTGATCAGGTCCTGCGATTGGTTCCAAATATTCAGACTTTTCGCACAACATTGAGATGCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTTGGTGGTATAAATCTGGCGTTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTACCTAATATGTTAGTGTCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTACCAGTTTGGGATCCTAGAAGAAATCCCAAGGATAGATATCATCTAATGCCTATAATTACCCCTGCTTATCCTTGCATGAATTCTACATACAATGTGACATCAAGTACATTGCGTGTTATGTCAGATGAGTTTGGGAGAGGAAGTGAAATGTGTGAGGCTATGGAGGCTGGCAAGGCTGATTGGGATACTCTTTTTGAGCCTTGTCCCTTTTTTGAATCTTACAAGAATTATCTACAGATAGACATAACAGCAGAGAATTCAGATGACCTTCGACAATGGAAAGGCTGGGTTGAGTCTCGTCTCCGCCAATTAACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGCCATCCACATCCTGGTGAATTCTCAGACAAATCTAGACCTTTTCATCACAGTTACTTCATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGCTAACTGTTGAAGAATTCAAGCATTCTGTCAATGCTTACACACTATGGAAAACTGGAATGGATATCCATGTGTCTCATGTGAAACGTCGCAACATACCTACTTACATATTCCCTGGTGGTGTCCGACCTTCCTGCCCAGCAAGGAGCTGCAAGTTGGAGCCTCAAGGAGGTAAAGGAGCTGCAGTTGGAGCAGATGATACGAAGAAGAGAAGGAAACCAGAGGATGACATGGATAATAATTCAAAGAATTCCAAGTCCCCTGTATCTTTACCTGTTCCCAGCAGGGAAGTTTATGAAGATACGACTCCTATTAAATTGGATGAATCAGAAGTCAAAGGTATTGAAGGACAGAAGAGCAAGAAACTTTGTCTGAGATCTCCAGGGGAGATTCCTTCTGGGGATAGTGAAACCAATGGATTTGTAACAACCAACCAACTAGTGAACCCTATTCTTGCTGCTACTGATACATCTAGTTCTAAAGAAGAAGAAAATCTAGCCATTGAAAAGATTATATCCGGTCCTTATGATGAAAATAAATCTTTTCCAGAAGAACCTGAAGAGCTTGAAGATGACACTCAGTATAGAAATCAAGTCGAAGATACTGGTGGGAACATACAAAATAACATAACTGAATCTTTAGTCCCAAAGCCTGCAGTGGCAGAAGAGCCAGTTGTTTATATCGAAACTACTTGTTCAACTCGTTTATGCTCCTCTGAGGGCTTGGAGGAGCTTGAGCCTGCTGAGCTAACCGCCCCATTGTTAACCGTGCCTCCTGCTCCTGCACTGAAGAAGCCTCTTATCAGGTTGAACTTCACTTCCTTAGGAAAAGCTGCTGACAAGAGTTCTTAG 2202 0.4255 MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEILGRLDQIVKIWVKNISRGKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELWKMLSEMQEVTELHPVPDAHVPVMKFKFNGISVDLLYARLALWVIPEDLDISQESILQNVDEQTVRSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFGRGSEMCEAMEAGKADWDTLFEPCPFFESYKNYLQIDITAENSDDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDKSRPFHHSYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKTGMDIHVSHVKRRNIPTYIFPGGVRPSCPARSCKLEPQGGKGAAVGADDTKKRRKPEDDMDNNSKNSKSPVSLPVPSREVYEDTTPIKLDESEVKGIEGQKSKKLCLRSPGEIPSGDSETNGFVTTNQLVNPILAATDTSSSKEEENLAIEKIISGPYDENKSFPEEPEELEDDTQYRNQVEDTGGNIQNNITESLVPKPAVAEEPVVYIETTCSTRLCSSEGLEELEPAELTAPLLTVPPAPALKKPLIRLNFTSLGKAADKSS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02444 733 Pfam Nucleotidyltransferase domain 82 165 IPR002934 GO:0016779
Phco7g02444 733 MobiDBLite consensus disorder prediction 499 569 - -
Phco7g02444 733 Pfam Poly(A) polymerase predicted RNA binding domain 364 422 IPR007010 GO:0003723|GO:0043631
Phco7g02444 733 MobiDBLite consensus disorder prediction 551 569 - -
Phco7g02444 733 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Phco7g02444 733 MobiDBLite consensus disorder prediction 621 643 - -
Phco7g02444 733 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Phco7g02444 733 MobiDBLite consensus disorder prediction 514 532 - -
Phco7g02444 733 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Phco7g02444 733 CDD NT_PAP_TUTase 57 211 - -
Phco7g02444 733 PANTHER POLY A POLYMERASE 9 536 - -
Phco7g02444 733 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g02444 733 Gene3D - 17 359 - -
Phco7g02444 733 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Phco7g02444 733 MobiDBLite consensus disorder prediction 1 18 - -
Phco7g02444 733 FunFam Putative poly(A) polymerase gamma 179 359 - -
Phco7g02444 733 FunFam Nuclear poly(A) polymerase 4 363 478 - -
Phco7g02444 733 FunFam Poly(A) polymerase alpha, putative 49 205 - -
Phco7g02444 733 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 363 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Phco7g02444 733 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0043631|GO:1990817
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02444 Phco-Chr7 42647259 42653528 Dispersed/Transposed