Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02438 ATGCTGACGAAGCAAATTGCTCTCCTTGAAGACCGCAAGAAGAAGAGGACGTTCTCAAACCGTGAATCGGCTCGCAGGTCCCGAATGCGGAAAAAGCAACAGATTGAGTCCCTTCAGTGTCACCTTGATCATCTACTAACACTGAATCGCCAACTCTCTGAAAAGATCATTTACTTGCTGGAATGTAACCAACAAATCCTCCAACACAATGTGCAACTCCAAGACAAGGTTTCTTACCTTCAAGTTGCGGTCTCTGAATTGTTGGGTCCTCTGGGGCATGTCGATCAGAGTAACCACCTCCCCACTGAGCCTTCTTCTGCTTCGAAGTTCCAGCAATCGCTTGCTAGTTCAGTGGTTGAGTAG 363 0.4738 MLTKQIALLEDRKKKRTFSNRESARRSRMRKKQQIESLQCHLDHLLTLNRQLSEKIIYLLECNQQILQHNVQLQDKVSYLQVAVSELLGPLGHVDQSNHLPTEPSSASKFQQSLASSVVE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02438 120 CDD bZIP_plant_GBF1 13 61 IPR045314 GO:0003700|GO:0006355
Phco7g02438 120 Gene3D - 9 69 - -
Phco7g02438 120 SMART brlzneu 8 72 IPR004827 GO:0003700|GO:0006355
Phco7g02438 120 MobiDBLite consensus disorder prediction 98 120 - -
Phco7g02438 120 SUPERFAMILY Leucine zipper domain 12 68 IPR046347 GO:0003700|GO:0006355
Phco7g02438 120 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 15 30 IPR004827 GO:0003700|GO:0006355
Phco7g02438 120 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 10 59 IPR004827 GO:0003700|GO:0006355
Phco7g02438 120 FunFam BZIP transcription factor 10 61 - -
Phco7g02438 120 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 5 91 IPR044521 -
Phco7g02438 120 Pfam bZIP transcription factor 10 69 IPR004827 GO:0003700|GO:0006355
Phco7g02438 120 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02438 Phco-Chr7 42533091 42533453 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco7g02438 bZIP_1 2.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02438 7 42533091 42533453 Phco8g01445 8 14931365 14931997 PCT