Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02434 ATGCAGCATATACATTCCATCTGCGGCGGTGACCGCAGGCTCAGGCCGCACCACCACAACCACCACCAGCCGCTAAAGTGCCCTCGCTGTGACTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGCCATTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTTCGCAATGTCCCCGTCGGCGGTGGTTGCCGTAAATCCAAACGCTCGAACAAGCCCAAAAATACCGCCACCAACACCAACAGTGATAACAACAACCCTGCCTCTTCCTCGCAGATCGCTCCGGCAACGGCGTCAACGACGCCGTCGGCTGCGGAGGCGGAGCGCAACTCGAACTCCCACTCCAGCAGCGAAAGCTCCACCCTAACCGTCACGGAGGCGATGTCGGCGCCGACATCAAACGCTTTGTCTAAGAACTCTTTGTTTCTCGACAACGTTCGCGAGCCGAAGTTGTTCGCTAACGCTGATAACCCCTCTTTGGAGGGCGGTGGCATTTTCTCCGAGATAGGGGGCTTCACCAGCCTCATTGGTTCAAACAACGAAGCACTGGGGTTTGGGTTTGGGAATTCCAGTAATAATGACAGCAACAGCAACATCCTCGATACGACCCCGTTTCGGTTCGGTGTTGCTCATCCGCAGGGGAATAATCAGGCGCAAGTGGCACCAGGCGGAGAGCAGCAGCAGAATCATCAGGAGTTCGGTACGGCGTCGTTTCTCGATCTGACGGCGCCGGTGGAGTTTTCGTCGTTGGCGCAGAAGAGTGGTGAAGATGGAGGGTTTGGGTCGTTGGATTGGCAAGCCGGTGCGGATCAAGGTTTGTTTGATCTCCCTAACACCGTTGATCAACCGTACTGGACCCACACCGATTGGTCTGATCAAGATAATCCTCCTCTCTTTCACCTTCCTTGA 939 0.5548 MQHIHSICGGDRRLRPHHHNHHQPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKNTATNTNSDNNNPASSSQIAPATASTTPSAAEAERNSNSHSSSESSTLTVTEAMSAPTSNALSKNSLFLDNVREPKLFANADNPSLEGGGIFSEIGGFTSLIGSNNEALGFGFGNSSNNDSNSNILDTTPFRFGVAHPQGNNQAQVAPGGEQQQNHQEFGTASFLDLTAPVEFSSLAQKSGEDGGFGSLDWQAGADQGLFDLPNTVDQPYWTHTDWSDQDNPPLFHLP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02434 312 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 223 IPR045174 GO:0003700|GO:0006355
Phco7g02434 312 MobiDBLite consensus disorder prediction 1 26 - -
Phco7g02434 312 MobiDBLite consensus disorder prediction 83 141 - -
Phco7g02434 312 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Phco7g02434 312 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Phco7g02434 312 MobiDBLite consensus disorder prediction 69 141 - -
Phco7g02434 312 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02434 Phco-Chr7 42492818 42493756 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco7g02434 zf-Dof 4.5e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02434 7 42492818 42493756 Phco7g02434 7 42492818 42493756 ECH
Phco8g01437 8 14859221 14860075 Phco7g02434 7 42492818 42493756 PCT