Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02423 ATGACGTTGGGCGCGGCATATGCAAAAGCGCGTTTCCTCGGAAGCACTTCTACGTTCTCCCACTACAGAAAAAAGATTGCAGTGGCGAACTTATTCCAGAAGTACGGTTTCCCCTCTTCCCTCATCAACTCCTTCCTCTCCCGCAACCCTTCCCTTCTCCACTCCCCTCTCCATCAACTCCACCAATCCCTCACCACCCTCTTCTCCCTCCGCATTCCCCAAAACGACTTCGTTTCCCTCCTCACTACCCACCCCTCCCTCCTCCACCAATCCTTCCACCAAACCCTTCAATCCCGTCTTCCCCATCTCCAAACGCGCTTCCCCACACTCTCCCATTCCACCCTCGTCAACCTCCTCCTCTCTTCCGCAAAGTTACACCTCGACCCCCTCCAACTCTCCCCCAAACTCAACGTGCTCAAAACCAATTTCGCGTTTTCTGACGCCACCGTGGCCAGCGTTCTGGAAGGGTTCCCCGACGTGGTTGTCACGAGCGAGACCGAAATCGCGAGCGTGATCGATTTTCTCGCGGGGTTCGGAATCCCCCGGGACGAGATTGATCAAGTTGTCCGTTCGTTTCCTAGGGTTTTGGCGCTCGGTGTTGAGCACAGGCTGAGACCGTTGTTTCGGGAAATCAAGGAGCTAGGGTTTTCCAATCGCGAGATGAGGGGAGAGATCTCGCGGGACCCGAGGATTCTGGGGATGGAATTAGGAGAATTTACGCGGTGTTTGAGGCTGTTAGAAAGTTTAAGATGCAGGGAAGCTATTAAAGAGAGGGTTTTGGGTTCGGGTCTAATGAGAGCGTGTTTTGAAGTGAAATTAAGAGTGGATTGTTTGTGTGGGTATGGTTTGACTCGAAGGGATGCTCTGAAGATTATTTGGAATGAGCCAAGGGTGATTTGTTACGAGGTTGCGGATATTGAGAGGAAGGTTGAGTTTCTGGTGCAGAGGATGAAGTGTGGTGTGGAGTGTTTGGCAGAGGTGCCTAAATACTTGGGAGTGAATTTTGAGAAGCAGATTGTGGGCAGGTACAGTGTGGTGGAGTGTTTGAGGGGGAAGGGTGCGATTGGGTTTGAGGTTGGGTTGAAGGATTTGGTAATGCCTTCTAGGCTTAGGTTCTATAATCTTTATGTGAAGCCATACCCGGAGTGTGAAAAGATCTATGGAAGGTTTTCTGGGTGTGGTGTTCAAGTTAAGATGAAGCATCCCGCTGGACTGTGGAAACTGTTTAAACCGCAGAAGTTTACTGAAAGGGATGAAGATGTGAAGAACGTGAGGTCCTTCATGGAGTCTCTGGTTTAG 1299 0.5073 MTLGAAYAKARFLGSTSTFSHYRKKIAVANLFQKYGFPSSLINSFLSRNPSLLHSPLHQLHQSLTTLFSLRIPQNDFVSLLTTHPSLLHQSFHQTLQSRLPHLQTRFPTLSHSTLVNLLLSSAKLHLDPLQLSPKLNVLKTNFAFSDATVASVLEGFPDVVVTSETEIASVIDFLAGFGIPRDEIDQVVRSFPRVLALGVEHRLRPLFREIKELGFSNREMRGEISRDPRILGMELGEFTRCLRLLESLRCREAIKERVLGSGLMRACFEVKLRVDCLCGYGLTRRDALKIIWNEPRVICYEVADIERKVEFLVQRMKCGVECLAEVPKYLGVNFEKQIVGRYSVVECLRGKGAIGFEVGLKDLVMPSRLRFYNLYVKPYPECEKIYGRFSGCGVQVKMKHPAGLWKLFKPQKFTERDEDVKNVRSFMESLV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02423 432 PANTHER CGI-12 PROTEIN-RELATED 124 380 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 FunFam Transcription termination factor MTERF15 mitochondrial 165 387 - -
Phco7g02423 432 Pfam mTERF 111 237 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 Pfam mTERF 30 101 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 Pfam mTERF 273 365 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 78 121 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 43 73 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Phco7g02423 432 Gene3D Transcription termination factor 3, mitochondrial 162 390 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco7g02423 mTERF 4e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02423 7 42368135 42369433 Phco7g02423 7 42368135 42369433 ECH