Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02421 ATGTATAGTCAAGTAAATCGTGGTTCTCATTTCGGGCAGAGTCCTGCCCCTCCGGTGCTGCCGCCTCCACCACCACCACCACCACCACAGCAGTATCAGCAGGCTCCGCCACATTTCCATCGGTTCCCACCACCTAACGTTGGTGGTCCTCCTCCTCCACCACCGCCTAACATTGGTGGTCCACCCCCACCACCACCACCTCATCATATTTATTTAAATGGACCTCCTCCTCCTCCTCCACCACCGCTTCCTAATTCGTCTTCCTTAGTTCCCATGAACCTTCCGGTTCAAGGTTCACTTAATGTAAGGCCAAATGCAGGACAATCCTATGCTATCCCTTCTCAATTACACCATGGGAACACCATGGCGCCACAAGCATCATGGGCTCCAGGGCCACCGGCTAGAGTATTGCCACCACCACCTCCACCCCATCCTCCCTCGGCTTCTCAAGGTCAAATTTTGTATAACACCCCTTTCCATCGTCCACCTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATGCTCCTCCACCACCACCCCCTTCACCAGGTTATTTCCATTCAACTGTTGGGAATTACCAAGTGCCTCCTGTTATTCCCCCACCTTTGCCGTCGTCTCCACCACCTGCTCTTCCGGCTCCACCGCCTCCTCCTCTTAATGCTCCGGTAACCTCCTCCTCCTCATCAAATGCTGCACGCACTGACGACCTTCACCCTGTGAAGGTTTTTGGGTTAGAATCAAAGACTATGGATTCGGTTGACGGAGTTGTAGCTTCTCTTCCGTCTGGTATTGTACCTGTACATGGTTCTGATTCTAATTGGGATGGTCCAAGTTGTAGAGAGGTTGCTGGTGCTGAAAAAGATGAGGATCTTCCCCCACCTAAGCCAACGGAAGAAAATACTATATTGAAGATAGAAGCTTTGTGTCAGCTTATTTCTGAGAAGGGTGCTGATATTGAAGATAGGATTCGTCGAGATGAATTTCAAAATCCTGAATATGAATTTTTGTTTGGCGGAGACCCAGGAACTGAGGCTGGAATTTCTTACACTTATTTCCTGTGGATGAAGAAGAAATATAATTTAGACACTGGATGGCATGAAAAGAAAAGGCAACCAGATAGAGTATATTCTTCAGGTGAGCAGTATAACCTGCATGTTGCAACTGCGGGTGCTGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAACTATGCAACCGAAGCCCATACTCACCAACATAATCGGGATGATGAAGTGTTTAGTGTGAATCAGAATATAGGGCAGCTGCAGACATTATCAGAGAATGATCCTGCCAGGGACATCTCATCCTGCTGTCCATCATACATGGGAGTCAGCAAACAGAATGAAGGACCAGAGATTTTATCTGATCTGGAGTACAGGAAATCTGTAAGACCAGTTACCAAGGTTTGTAGTCCTGAGAATGACTCCACTGAAGTGGCTGAGTTATCCTTGTGCACAGCTTTGGAGAAAGCTGCAGCTTGTGTTGATGATTTGGTATGTAATGTTACTTCGGATCACAATGAAACCACTACTACTAATAGGGATTATGGGCCACTCCTAGCGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGAGGATGAAAGCAATGCTGCAAATGCTAATGTTTTCACATTCTCAGGAGGTGCTGATACTGGTGTTTCAGTTGTCCATAAAGATTCTGGGAGTCATATGGAAGTTGGTATTGGATCTAAGAGTTCTGCCAGTACTCAAAAGGGGTTTGGGTCAGTCTCCATAACATCACGGGATGATTCAGAAATATCTCCACATTTATTACCAGAGTCTAAGAAAACTCGGAACCGAAAAAAATTTGTCTCACGGTGGAGTAATGATGGATGTATTGAGCACCAACTTGAAAATCAGATGTCTGTTAATTTTGCTTCTTCGATAGAAGCTTTCAAGGGCAAAGATAGATTAGAGTATACTGCCATTGACAGTGATAGTAAAAGTGGTAACGCAGAAAAGGAAGATGAGGGGAAAACCTCAAAATTTGAACCAAATGTTATGAAAGTGGATGAATTTGGAAGACAACTAAGAGAAGGTCTTTCAGATAGTGATTCTGATGATTCAGGCCTTCACCGGACAAGGAGGCTAAATAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGAAGTAGGAGGAATAGGAGGAGTCCTCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCGGCATCGAAGAAGCAGTAGGTCTCCAATCTCAAGACGTCCAGGTGACTTTCGTGGTGAGAATATTAAAAGGGACAAGGATCAGTGCTTGGACTTTCTTCGAGGTAAGTGCTATCGAGGAGCATCTTGCAGGTACATTCACCATGAATCTGATATGAATGCTACTTCAAGGCACTATAAGAATAAACATGATTTGGAAGTCAGTTATTATGAAAAAGAATCTAAGACTAATGGAGACATGACGAATATTTCTTCTAAAGTGTTTGATAATGAGCTTGATGGAGTTAGAAGTCAGGATGTGGATCTTAGCTTGAATGTGACTAGCCAGGAAGTAGTGCAGAAAAAAGAAGATTCAGGGAAGAATGTTGTTGCATCTACTATCATTCATCTTGATGGTCAATCAGTTAATAGCAATCCAGGTAAATCTAAATCTATCAGAGAGATTGCTCCTGAAATGCAGGAAACCATTGTAGTCAGGGAGGATAGTAAGAATTCAATCCATGAGAATGATGGTTCAGAAGCAGGTGATTCTCAACAGCAACACATGGTTGAAGGCTTTCACCCTGATGCTTTAGGCTGTGATAATACTTCTAAATCATGTGGTACATATAAAGATATTCTCTCAGGAGATGGTCTATTTGTTCAGAAAATGCCACTCAGTGTTTCTGCTGTTGGAATTCAGGAACATTCTGGTTACCCATCTCAGCATGTAAATGCTTCCTCTGTGACTGATACATCACATGATAAAAGATCAACTGTTTCTACTATTGTTAATGAAGTTCCTGGCAGTGTCATATCAGAGCAGGCTTCATTGCACCCTCAGGCTTCAAAAGAGTTACCTCAACAATTTGGCTCTTCAGTGGAATTTCCACATCATAATTACCAGTTGACTGCATCTGTTGTTTCACATTCCCCAGGTGAAAATCCTGTGCATATGCCACAACTTTCAAGGCAGTATGATGTGATGCAACAAAGTGCATTCTTTCCTTTCCAATCCACTACCAGAGAAAAGTTTGAACCTTATCCTCCTCCTTTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCGCCACCACTGCCACCACCACCAAGAGTGGTGTATGATCCCAGTGTAAACTCAGGAGCTGTAAAATCATATATTTCTTCTGAATTCATTCAGAATCAATTGCAGTCAAGAACTGAAATTGTTTCCCAGACTTCCATGAAACCTTTACCAACTAGTTCTCAGAGTTCTGAATTTCAGGATCTAGCATACCCTCCCATGCAGGATCATTCACGAACTTTCATGCTTGCTGAACCTTTCTCTCCAAAGCAACTTCCTCACGGGAACCCAGCTAGTCAATTGCTTTCAGGATCTAGTCTCAATAGAAATGAATTTCATAATCAACTTCCAATGCAGGATTCAAAATTTTCCAGTACCACATCGTTTGGCAGCTTGCAGCCTCAACAAAATCAATTTTCCTGGAAATCGGATGTGAACAGACAACAACCTTCTCTGGGTGGCAAGTTACACCCCGAAGGACATTTTATGACATCCTCGCACATTGATTCATTGTCACAGAAGCAACAATCAATGTATAATTTTCAGTGTTCTGTACCTGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATACCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCACCATTTGGTGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTTTAGACAGGAAAATGAAATAATCCATGGTAACAATTATGCTTCTTCTAGATTGAACCATACTACTGTAAATGGGGAGAGTGATGGTGGGGTTGGATCAAGACATTCGGCATCTGCATCAAAATCAGGTAGATCTCTTGGTCAGATTTTACCTAGATCTGGTGGTGACCAATATGATCCACTTTTTGACAGCATTGAACCATCATCCTCTCTGAGAAAAACCGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAACGTCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGATGTGGATGAAAAAAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCCCAAAATAATGATGAATATGGTGAGACAGCAGATGCAGAAATTGGTGATATTGAAAATGAGAGCCTAAGTGATGATGTAGATGTTGCAAAAATGTCTACAGAGGAGGTTGAGATTAATCGGGTCAAGTCTCCAGGGAAAAGAAAGAAGAGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCCATTGCGAACTTTGTAAAGGAAGTTTTAAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTCAAAACCATTGTGAAGAAGACCGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTGTACCTAAGTCCCAAGCGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTGAAGGTGCGAGAATGGTTGGTCAAGATTCCAGTTCCTGAAGAATTTTTGGTCGCCCCCAATATAAACTGGCATTCGATTGGAGGGGGAGTTGAACCAAGTTCTTCCCCTGTCAGAAAGCCAGGCTACCACCCTAGCTTGTCACTTAAGTGCCAATATCACTTGTCTTTGCTGTGTAGAGTTTAG 5058 0.432 MYSQVNRGSHFGQSPAPPVLPPPPPPPPPQQYQQAPPHFHRFPPPNVGGPPPPPPPNIGGPPPPPPPHHIYLNGPPPPPPPPLPNSSSLVPMNLPVQGSLNVRPNAGQSYAIPSQLHHGNTMAPQASWAPGPPARVLPPPPPPHPPSASQGQILYNTPFHRPPLQPGDVQNLHNAPPPPPPSPGYFHSTVGNYQVPPVIPPPLPSSPPPALPAPPPPPLNAPVTSSSSSNAARTDDLHPVKVFGLESKTMDSVDGVVASLPSGIVPVHGSDSNWDGPSCREVAGAEKDEDLPPPKPTEENTILKIEALCQLISEKGADIEDRIRRDEFQNPEYEFLFGGDPGTEAGISYTYFLWMKKKYNLDTGWHEKKRQPDRVYSSGEQYNLHVATAGADSDMEMEDDITLSDKDQGSNYATEAHTHQHNRDDEVFSVNQNIGQLQTLSENDPARDISSCCPSYMGVSKQNEGPEILSDLEYRKSVRPVTKVCSPENDSTEVAELSLCTALEKAAACVDDLVCNVTSDHNETTTTNRDYGPLLASGSPIRLLQDYASDDTSANEDESNAANANVFTFSGGADTGVSVVHKDSGSHMEVGIGSKSSASTQKGFGSVSITSRDDSEISPHLLPESKKTRNRKKFVSRWSNDGCIEHQLENQMSVNFASSIEAFKGKDRLEYTAIDSDSKSGNAEKEDEGKTSKFEPNVMKVDEFGRQLREGLSDSDSDDSGLHRTRRLNKRDRSWSRSRSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSSRSPISRRPGDFRGENIKRDKDQCLDFLRGKCYRGASCRYIHHESDMNATSRHYKNKHDLEVSYYEKESKTNGDMTNISSKVFDNELDGVRSQDVDLSLNVTSQEVVQKKEDSGKNVVASTIIHLDGQSVNSNPGKSKSIREIAPEMQETIVVREDSKNSIHENDGSEAGDSQQQHMVEGFHPDALGCDNTSKSCGTYKDILSGDGLFVQKMPLSVSAVGIQEHSGYPSQHVNASSVTDTSHDKRSTVSTIVNEVPGSVISEQASLHPQASKELPQQFGSSVEFPHHNYQLTASVVSHSPGENPVHMPQLSRQYDVMQQSAFFPFQSTTREKFEPYPPPLHMQNAHFNVPPNSSWTSLPLPPPPLPPPPRVVYDPSVNSGAVKSYISSEFIQNQLQSRTEIVSQTSMKPLPTSSQSSEFQDLAYPPMQDHSRTFMLAEPFSPKQLPHGNPASQLLSGSSLNRNEFHNQLPMQDSKFSSTTSFGSLQPQQNQFSWKSDVNRQQPSLGGKLHPEGHFMTSSHIDSLSQKQQSMYNFQCSVPEANLGVPGETATVSRYPPDFLDSNHSTSLPPFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIIHGNNYASSRLNHTTVNGESDGGVGSRHSASASKSGRSLGQILPRSGGDQYDPLFDSIEPSSSLRKTDFDQKQEVTGESNVSLRPKSSYMSLDVDEKNKQEEVGAVASTTSQNNDEYGETADAEIGDIENESLSDDVDVAKMSTEEVEINRVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKVREWLVKIPVPEEFLVAPNINWHSIGGGVEPSSSPVRKPGYHPSLSLKCQYHLSLLCRV 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1246 1276 - -
Phco7g02421 1685 Gene3D Surp module 304 360 IPR035967 GO:0003723|GO:0006396
Phco7g02421 1685 MobiDBLite consensus disorder prediction 131 148 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 195 222 - -
Phco7g02421 1685 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 317 1626 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 588 629 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 590 615 - -
Phco7g02421 1685 Gene3D - 791 846 - -
Phco7g02421 1685 SUPERFAMILY Surp module (SWAP domain) 291 355 IPR035967 GO:0003723|GO:0006396
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1390 1499 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1246 1289 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 89 122 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 675 726 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 15 88 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1 235 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1000 1019 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1390 1419 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 743 776 - -
Phco7g02421 1685 MobiDBLite consensus disorder prediction 675 789 - -
Phco7g02421 1685 ProSiteProfiles Zinc finger C3H1-type profile. 791 818 IPR000571 GO:0046872
Phco7g02421 1685 MobiDBLite consensus disorder prediction 1482 1497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02421 Phco-Chr7 42330963 42342351 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phco7g02421 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02421 7 42330963 42342351 Phco7g02421 7 42330963 42342351 ECH