Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02417 ATGATGATGGCGAGTTCAAGGGAAGGTCAACAAGCCAAGCAAGAAGGTGGCCCCATTAATATTGACAAGTTTTCCAAGGCATCTTCCAGTACAAAACAATGGACAGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTTGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATAAGAGGGTTGAGAGACAGAAGGATTAGGCTCTCAGTGCCCACAGCAATTCAGCTATATGATCTTCAAGACAAGCTTGGGCTAAACCAACCAAGCAAAGTGATAGATTGGTTGCTTGAAGCAACTAAACTTGACATTGACAAGCTCCCTCCACTTCAATTTCCTCAGGGCTTTGGTCAATTTCATCATCCACAAACCCTACTCCCCTTTCATGATTCAAGTGCCTCTCAGCTTTCTCTCGGACCCTTCGGTGATGCTAGCTCAACATTTGTAAGGGATGGGGGCGTTCAAAACGTCATAGCAAAGCCAAGGTATTGGGAAAGTATAGATTCAATATCAAGATTAAAAGGCAAGGAAACTGAAAAGGGCAAGTGGGTCAAAACAAATGAGCAAGAAAATCATGAAGACGATGTTGTTGGAAGCTACAGCAACTTGCATGCATCTACTCAGAGGCTTTTCCCTATGGGTAGTGGTACCACCACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATACCATGCCATATAACCCCTACAATGCTGAGCCTTCTAGTTTGTCGTTATCCCAATTTGGAGGCCATGGCTTGTTTCCTTCCCAGCAGGTAGATCCCGGTCCAAGCAGTGGAAATGGTGTTCAATTCCCGTCTTCTTTGCCATTACCTTCATCTGGTTCTCAATTTTTCTTTGGTTCATCTTCTGCTACACCATCAATGTTCACTACCTATGCTCCATTTCTTACACCCTCAGTAGACAATGATCCTAGACAGTTTAACCACATTCAGTTCTTGAACTCAGGTTCTCAAATCTTGCCTCATCCTCTCATTCCATCTCTTCACTCCTTCAATTCATATGTCAGACCCTTCCCAGCAACACCCTTTAGTTCAAAGCTTTTGGAGTCAGATAGCATCCGTAGTCAACATGATAAGGGTAGCACTTCTTGA 1122 0.4367 MMMASSREGQQAKQEGGPINIDKFSKASSSTKQWTAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPQGFGQFHHPQTLLPFHDSSASQLSLGPFGDASSTFVRDGGVQNVIAKPRYWESIDSISRLKGKETEKGKWVKTNEQENHEDDVVGSYSNLHASTQRLFPMGSGTTTTHSLLPGLLNNTMPYNPYNAEPSSLSLSQFGGHGLFPSQQVDPGPSSGNGVQFPSSLPLPSSGSQFFFGSSSATPSMFTTYAPFLTPSVDNDPRQFNHIQFLNSGSQILPHPLIPSLHSFNSYVRPFPATPFSSKLLESDSIRSQHDKGSTS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02417 373 MobiDBLite consensus disorder prediction 255 276 - -
Phco7g02417 373 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Phco7g02417 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 279 IPR005333 GO:0003700
Phco7g02417 373 Pfam TCP family transcription factor 51 167 IPR017887 -
Phco7g02417 373 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02417 Phco-Chr7 42253259 42254380 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco7g02417 TCP 2.6e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01420 8 14657995 14659083 Phco7g02417 7 42253259 42254380 PCT