Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02401 ATGACGTGGGGAGGAACACCATCACCACACCACACCATACCTTGTTTTCATAAATATGGGTCTCTCAGCCTCAGCCTCAGCCATGTCCACCTTCTTCCCTTCTTCTATCAGCTGACTCCCAACCCTCAATTCATTCGGATGGAGCCTATGGACATAGTTGGAAAAGCCAAGGAAGACGCTTCGCTTCCTAAAGCAACAATGACCAAAATTATTAAGGAGATGTTGCCCCCGGACGTGCGTGTTGCTAGAGATGCGCAGGATTTGTTGATCGAATGTTGTGTCGAGTTTATAAACCTTGTCTCATCTGAGTCCAATGAAGTCTGTAACAAGGAGGAAAGAAGGACTATTGCACCGGAGCACGTGTTGAAGGCTTTAGGGGTTCTTGGATTTGGGGACTACATTGAGGAAGTTTATTCAGCATACGAACAGCACAAGCTGGAGACAATGCAAGACTCTTTGAAAGGTGCCAAGTGGAGCAACAGGGCTGAAATGACCGAGGAAGAAGCATTGGCTGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGAGGAGCCATTACTTCCAAGCAGCCAGACGATGACCCAAGTTTAGAGAGCTAA 609 0.4745 MTWGGTPSPHHTIPCFHKYGSLSLSLSHVHLLPFFYQLTPNPQFIRMEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALGVLGFGDYIEEVYSAYEQHKLETMQDSLKGAKWSNRAEMTEEEALAEQQRMFAEARARMNGGAITSKQPDDDPSLES 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02401 202 PANTHER PROTEIN DR1 HOMOLOG 47 201 IPR044255 -
Phco7g02401 202 FunFam Negative cofactor 2 beta 52 189 - -
Phco7g02401 202 SUPERFAMILY Histone-fold 58 189 IPR009072 GO:0046982
Phco7g02401 202 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 60 125 IPR003958 -
Phco7g02401 202 MobiDBLite consensus disorder prediction 183 202 - -
Phco7g02401 202 Coils Coil 161 181 - -
Phco7g02401 202 Gene3D Histone, subunit A 50 189 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02401 Phco-Chr7 41925905 41929116 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phco7g02401 CBFD_NFYB_HMF 1.4e-22 CL0012