Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02392 ATGGTTGATCACTATAACAAGTTGGTTAAACTAGCTGCGAGGGCTTTTTACGATGATCTAACGAGTAAAGGAGAGAATCAACCCAAATCGGGAAGGAGTGATAACAGAGGAATCGCTGTAGTGATTCTTGATGCCCTCACAAGGCGACAATGGGTCAGAGAAGAGGATTTGGCAAAAGATCTCAAATTACACACAAAACAACTTCGCCGAACTCTGCGGTTTTTCGAAGAGGAGAAGATTATTACTCGAGAATATAGGAGAGAGACAGCAAAAGGAGCAAAATTGTATAGTGCTGCTACAGCCGCTACAGTTGATGTTCAACTGACTGGAAAAGAGGGAGAAGAGAAGGTTAAGTTGCACACACACTCTTACTGTTGTCTAGATTATGCACAGATATATGATGTGGTTAGGTACAGAATTCATCGCATGAAGAAGCTGCTGAAAGATGAATTGGACAACAAGAACACAATTGAAGAATACATCTGTACAAAGTGTGGAAAAAGATACAATGCTCTGGATGCATTGCGGTTAGTATCTTTTGAAGATGATGACTTCCATTGTGAAAGTTGTAATGGAAAACTTGAGGTAGAAAGTGACAAGTTTGTTGTTCAAGAAGGGGCCGACGGAGATGATAATGCAAGAAGACGACGACATGAAAAGTTGAAAGACATGCTTCAAAAGATGGAGATACAGCTCAAGCCTTTAATGGATCAACTCAGCAGGGTGAAAGATTTGCCTGTTCCAGAATTTGGCAGTCTCCTAGCATGGGAAGCTCGAGCTAGTGCTATGGGGCGTGCCAATGGAGATATGGCTGGTGATTCTAAGATTTCTCAGCTTGGATATAATGGAGCACCAATGCCTTATAGTGGGGATACCAAGGTTGTGGTGGATTTCAATGGGACTGAAGGCAACAGACATGATGTTAAGTCTGAAACTGAAACATCTCTAAAGGTTTTGCCACCATGGATGATAAAGTCAGGGATGGTTCTTACAAAGGAACAACGAGGAGAGGTGAAGGAGGAAATAAAGATGGATGGGACTTCAACTTCCACATCAGCACAGTACTCGGATGACAAGAAATCAACAGTTGATCATGATGACAAAAAAAATATACAGGACGAGTATATCAAGGCTTATTATGCTGCTCTGCTTAAACAACAACATGAAATGGAAGCTTCTAAAAAACAAGATTTGACAGATACATTTACTGAAAATGATCCTTCTAGCCATGCTTCTAATCGTCAAGTTGGCATTAAATCAAAATACGAGGAAGATGATGATGGTACTGACTGGGAGCAAGCTCCAGTTGCAGGTACTGGAAATGAAAATTACAAGGTCAATGATTTGAATGTTCAAGCTGATGTTGCTCCAGCAGATGTCGATGAAGATGAAGATGTGGACTGGGAGGAAGGTTGA 1416 0.4117 MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKLYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESDKFVVQEGADGDDNARRRRHEKLKDMLQKMEIQLKPLMDQLSRVKDLPVPEFGSLLAWEARASAMGRANGDMAGDSKISQLGYNGAPMPYSGDTKVVVDFNGTEGNRHDVKSETETSLKVLPPWMIKSGMVLTKEQRGEVKEEIKMDGTSTSTSAQYSDDKKSTVDHDDKKNIQDEYIKAYYAALLKQQHEMEASKKQDLTDTFTENDPSSHASNRQVGIKSKYEEDDDGTDWEQAPVAGTGNENYKVNDLNVQADVAPADVDEDEDVDWEEG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02392 471 ProSiteProfiles TFE/IIEalpha-type HTH domain profile. 5 137 IPR017919 -
Phco7g02392 471 MobiDBLite consensus disorder prediction 391 471 - -
Phco7g02392 471 SMART tfiie3 37 208 IPR002853 GO:0006367
Phco7g02392 471 Coils Coil 218 238 - -
Phco7g02392 471 MobiDBLite consensus disorder prediction 334 366 - -
Phco7g02392 471 MobiDBLite consensus disorder prediction 457 471 - -
Phco7g02392 471 SUPERFAMILY Zinc beta-ribbon 150 197 - -
Phco7g02392 471 MobiDBLite consensus disorder prediction 402 416 - -
Phco7g02392 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 206 IPR013083 -
Phco7g02392 471 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT 2 471 IPR039997 -
Phco7g02392 471 FunFam Transcription initiation factor IIE subunit alpha 145 207 - -
Phco7g02392 471 Pfam TFIIE alpha subunit 39 153 IPR024550 -
Phco7g02392 471 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02392 Phco-Chr7 41829476 41842888 Dispersed/Wgd