Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02373 ATGGACGGAAGGAAAGAGAATATAATCGCTGCTGTATCAGTGATTACACTGGTTATCCTCATAGTTATTGCTCGTGTCGCGTTGAAGCTCTCAAGGCCCTTCTTCCTTATTTTTGGTGCAGGTGTTGCTGTCATTCTTGCGGTCTTTGCTTATCTACTCCTCAGCACAAGGTACAACCGCAGGAGGAGGCTATTGGAGTCACAGTTGAAATCTGAAGGCCAAGAACTTCGCATAGAGTACAGTTTCTTGAAGAAAGTTGCGGGGGTTCCCATTAAGTTCAGATACAAGGAGCTTGAGGAAGCCACTGATGGGTTTCAGGCACTGATTGGAAAAGGTGCTTCTGCTTCAGTTTTCAAAGGTATTCTCGATGATGGCACTTCAGTTGCCGTGAAACGAATCGATGGAGAGGAAAGAGGGGAGAGGGAGTTCAGATCAGAGGTTGCAGCCATAGCTAGTGTGCATCATGTGAACCTTGTGAGGCTATTGGGCTACTGTAATGCTCCAATAGCACCTAGGTACCTTGTTTATGAATATGTCTCAAATGGGTCTTTGGATTGTTGGATTTTTCCCAAAAGATTATCTCAGAGGCGCCGTGGTGGGTGCTTGTCGTGGAATTTGAGGTACAAAGTTGCGATTGATGTTGCCAAGGGACTTGCTTATCTTCACCATGATTGCAGGTCAAGGATCTTGCACCTTGACGTAAAGCCAGAAAATATACTGTTGGATGAGAATTATAGAGCACTTGTTTCAGATTTTGGTTTGGCAAAGCTTGTTGGCAAGGATGAAAGCCAAAAATTTGTGTCTGCTATTAGAGGAACAAGAGGGTACTTGGCACCTGAGTGGCTCTTAGAGCAAGGTATTTCCGATAAGACTGACATATATAGTTATGGGATGGTTCTCTTGGAGATTGTTGGAGGCAGGAAAAACGTCTCCTATATGGATGATGAAAAGGCCAAGTCCAAACGAAAATGGCAGTACTTTCCTAAGATTGTGAATGAGAAAGTGCGGGAAGGTAAACTCATGGAAATTGTTGATCATAGATTGTTGGAAGGTGGGGGTGTTGATGAGAGACAGGTAAAGACACTGGTTTATGTTGCTTTGTGGTGTGTGCAAGAGAAGCCAAGATCAAGGCCTAGCATGGCCCAAGTTGTTGATATGCTTGAAGGGCGTGTGAGGGTAGAACTGCCACCTGATACCAGAATGGTTCTTGTTGATTTTCTGTGTGTGGATGATAGTGCAACAGATAGCAGTAGCATGCCAAGGGTGGACTTTGTGTCGAATCAAATAGCACAAAGCGATGGTGAGTGTTCATCAACCTACTCTCTTGCTACCACTGTTTTGTCCGGAAGATAA 1353 0.4449 MDGRKENIIAAVSVITLVILIVIARVALKLSRPFFLIFGAGVAVILAVFAYLLLSTRYNRRRRLLESQLKSEGQELRIEYSFLKKVAGVPIKFRYKELEEATDGFQALIGKGASASVFKGILDDGTSVAVKRIDGEERGEREFRSEVAAIASVHHVNLVRLLGYCNAPIAPRYLVYEYVSNGSLDCWIFPKRLSQRRRGGCLSWNLRYKVAIDVAKGLAYLHHDCRSRILHLDVKPENILLDENYRALVSDFGLAKLVGKDESQKFVSAIRGTRGYLAPEWLLEQGISDKTDIYSYGMVLLEIVGGRKNVSYMDDEKAKSKRKWQYFPKIVNEKVREGKLMEIVDHRLLEGGGVDERQVKTLVYVALWCVQEKPRSRPSMAQVVDMLEGRVRVELPPDTRMVLVDFLCVDDSATDSSSMPRVDFVSNQIAQSDGECSSTYSLATTVLSGR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02373 450 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02373 450 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Phco7g02373 450 FunFam Putative receptor-like protein kinase 70 178 - -
Phco7g02373 450 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Phco7g02373 450 ProSiteProfiles Protein kinase domain profile. 103 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02373 450 FunFam Putative receptor-like protein kinase 179 395 - -
Phco7g02373 450 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Phco7g02373 450 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 397 - -
Phco7g02373 450 SUPERFAMILY Protein kinase-like (PK-like) 85 388 IPR011009 -
Phco7g02373 450 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02373 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02373 Phco-Chr7 41501166 41502518 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco7g02373 Pkinase 6.3e-45 CL0016