Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02358 ATGCTCAAGCTCCACAATCTTCTTCCATCCTCATCTTCTAAACTCCTCTCCAGCTACATTCTTTCACTCTCCACCAAACTCCCACCACCGCTAACACCACCTTTCTCTCACCAACTCACCACCACCGCCACCACCATGTCCATAAACCTACGCACACACGCCTTCGCCGGCAACCCGCTCCGATCCTGGACTCCCAACCGGGTTGAACCGTTGTCCCCCTCCACGGCATACGAGACCTTGAAAACGCGAATTGCGGAGAGCGCGGGCGAGTCCGCGTCGGTGAATTTGAAGGTGTTACCTTTCAGAAACGGGAGGCCCCTGGCGTCTGTGGCTAGCAGTGACACGTGGCGGTTGGCGTGGATGGGATTGGAGGAAGTGAAGGGGCTCTTAGGTGCGAACCTGAGCGCCGACTCGTTCGTGTATTTGGGGTCCGACGCCGAGGAGGATTCGGTGTACTGGGCGATCGACTTGTCAAGGGAGAGTAGCTTGGTGGCTAAATTTTGTGCCATGAAGCTCTGCTTTGTGGAGCTGAGAACGCTCATGGTTGCTACCGACTGGGTCGATTTGAAGGCCATGGGGAACTTGGCCATCGCTGGTCATGCCAGGGCACTTCTAGAATGGTATAATATATCACGATTTTGTGGACATTGTGGAGAGAAAACAGTCCCAATGGAAGCTGGGAGGCGGAAACAGTGTTCAGATGAATCATGCAAAAAGAGGATATATCCACGAGTTGACCCGGTGGTCATTATGCTAGTAATTGATTCAAAGAATGACCGTGCCCTTTTGAGCAAACAATCAAGATTTGTACCTAGAATGTGGAGCTGCTTAGCAGGTTTTATAGAGCCAGGAGAAAGCTTAGAGGAGGCTGTAAGAAGAGAAACATGGGAGGAAGTTGGTATTGAAGTGGGAGAAGTTGTATATCATAGTTCTCAGCCATGGCCTGTTGGACCAAATAGCATGCCATGTCAGCTGATGGTAGGGTTCTTTGCATATGCAAAATCCCTTGAAATAAATGTGGACAAAGAAGAGTTGGAAGATGCTCAGTGGCATAGTAGAGAAGAAGTAAGAAAAGCTCTGACATTTGCTGAATACAAGAAAGCCCAACAAACTGCAGCAGCAAAGGTAGAACAAATGTGTAAGGGAGTAGAAAAGACTCACAGCTTGTCTACAGACTTCAATGTGGAAAGCGGTGAACTTGCTCCGATGTTTGTTCCTGGACCCTTTGCAATAGCTCATCACCTTATATCCTCCTGGGCATTCCCAGATAAAGATGTAAATGGCATTGAATGCCATTCAAAACAACCCAGTGCTTCTATGTCAAATTTGTAG 1332 0.4872 MLKLHNLLPSSSSKLLSSYILSLSTKLPPPLTPPFSHQLTTTATTMSINLRTHAFAGNPLRSWTPNRVEPLSPSTAYETLKTRIAESAGESASVNLKVLPFRNGRPLASVASSDTWRLAWMGLEEVKGLLGANLSADSFVYLGSDAEEDSVYWAIDLSRESSLVAKFCAMKLCFVELRTLMVATDWVDLKAMGNLAIAGHARALLEWYNISRFCGHCGEKTVPMEAGRRKQCSDESCKKRIYPRVDPVVIMLVIDSKNDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEEVGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDAQWHSREEVRKALTFAEYKKAQQTAAAKVEQMCKGVEKTHSLSTDFNVESGELAPMFVPGPFAIAHHLISSWAFPDKDVNGIECHSKQPSASMSNL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02358 443 Gene3D - 91 243 - -
Phco7g02358 443 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 98 207 IPR015375 GO:0016787
Phco7g02358 443 Pfam NADH pyrophosphatase zinc ribbon domain 211 242 IPR015376 GO:0016787|GO:0046872
Phco7g02358 443 CDD NADH_pyrophosphatase 247 420 - -
Phco7g02358 443 SUPERFAMILY Nudix 195 371 IPR015797 -
Phco7g02358 443 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 244 387 - -
Phco7g02358 443 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 69 422 - -
Phco7g02358 443 FunFam Nudix hydrolase 19, chloroplastic 109 243 - -
Phco7g02358 443 FunFam Nudix hydrolase 19, chloroplastic 244 423 - -
Phco7g02358 443 Pfam NUDIX domain 247 361 IPR000086 -
Phco7g02358 443 ProSiteProfiles Nudix hydrolase domain profile. 243 373 IPR000086 -
Phco7g02358 443 ProSitePatterns Nudix box signature. 279 300 IPR020084 GO:0016787
Phco7g02358 443 PRINTS NUDIX hydrolase family signature 288 303 IPR020476 -
Phco7g02358 443 PRINTS NUDIX hydrolase family signature 274 288 IPR020476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02358 Phco-Chr7 41285776 41291438 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01551 8 15963305 15972969 Phco7g02358 7 41285776 41291438 PCT