Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02350 ATGTTCGTCCCAAGGGTCTTGTCCCGTTCCTCCGCAACCCTTTGTCGAAGCTTCACCTTCTCTGTTTCACGAAATTCCCAACCCTTTTCCAATCATTTTCATTCTCTCATCCACCCATCACCCAACAAGCTGATTCCAGTTCAAGCTACTTTGCGGAATCCACTGAATTCATCCTTGGCTTCGAGATTCGGAGTTTCTTCTTCGGCCTCATCTGAACCTGCTAGTAATGACGTAAAGGCATGTGAGGAAGCAAAGGTGACTGATCAGTCTGAAGAAGCCAAAGCTGCCGATCAAACCGAAGAATCAGATGTAGAGAGTGAATGTGATCAATCCAGGGATGATTTAATAAAGCTTGTTGCTGAGAAGGAACATCTCTTGAAGTTGAAACACAAGGAGATTGCGGAAATGCAGGACAAAGTTCTGCGAACTTATGCAGAGATGGAGAATGTCATGGGCAGAACAAGGCGTGAAGCGGAAAATTCGAAAAAATTTGCTATACAGAATTTTGCGAAGAGTCTACTAGATGTTGCTGATAATTTGGGAAGAGCTTCCTCTGTTGTAAAGGAAAGCTTTTCAAAAATTGAATTTCCTAAGCAGTCTTCTGAAGCAGCACAACTCCTGAAAACACTTTTAGAAGGTGTTGAAATGACAGAGAAACAACTTGCAGAGGTACTAAAAAAGTCTGGTGTAGAAAAATATGATCCTACAAATGAGCCATTTGATCCTCACAGGCACAATGCCATCTTCCAAATCCCTGATGCTACCAAGCCCCCTGGCACTGTTGGAGTTGTTCTGAAGGCTGGATATATGCTCTATGATCGTGTTCTTCGTCCGGCAGAAGTTGGTGTAACTCAAGAAGTAGATGATAACGAAGCAACTAAGTGA 885 0.4305 MFVPRVLSRSSATLCRSFTFSVSRNSQPFSNHFHSLIHPSPNKLIPVQATLRNPLNSSLASRFGVSSSASSEPASNDVKACEEAKVTDQSEEAKAADQTEESDVESECDQSRDDLIKLVAEKEHLLKLKHKEIAEMQDKVLRTYAEMENVMGRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIEFPKQSSEAAQLLKTLLEGVEMTEKQLAEVLKKSGVEKYDPTNEPFDPHRHNAIFQIPDATKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVDDNEATK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02350 294 Gene3D - 120 227 IPR013805 -
Phco7g02350 294 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 122 229 IPR013805 -
Phco7g02350 294 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 230 285 IPR009012 GO:0006457
Phco7g02350 294 PANTHER GRPE PROTEIN 52 286 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 CDD GrpE 134 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 Gene3D Head domain of nucleotide exchange factor GrpE 229 284 IPR009012 GO:0006457
Phco7g02350 294 FunFam GrpE protein homolog 113 228 - -
Phco7g02350 294 Pfam GrpE 93 284 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 PRINTS GrpE protein signature 141 157 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 PRINTS GrpE protein signature 264 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 PRINTS GrpE protein signature 237 252 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 MobiDBLite consensus disorder prediction 78 101 - -
Phco7g02350 294 Hamap Protein GrpE [grpE]. 76 285 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 ProSitePatterns grpE protein signature. 240 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Phco7g02350 294 FunFam GrpE protein homolog 229 285 - -
Phco7g02350 294 MobiDBLite consensus disorder prediction 65 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02350 Phco-Chr7 41197513 41200579 Dispersed