Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02342 ATGGCGCAATCCAGGTCTGGAATCTTGTGCTTAGCCACTCTCTTGTTATGCAGCGCTTTCGCAACCTCCTTTTCCACGGACCCTCCGTTGCTCCAACAACACAAGGACCGTGTCGGAAGGCTCCCTGGTCAGAACTTCAACGTCAGCTTCGCACACTACGCTGGCTACATCACCGTCGAGGAGAACGCTGGGAGAACACTCTTCTACTGGTTCATTGAGGCACTCGAAGATCCTCATTCCAAGCCTCTCATTCTATGGCTCAATGGAGGACCTGGTTGTTCATCCATTGCTTTCGGACAGTCCGAGGAAATTGGACCCTTTCATATAAATTCAGATGGCAAGGCTCTTCATCCCAATCCATATTCTTGGAACCGAGTTGCCAACGTTCTATTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCAAATAACGGATCCGACCTGCTGAACAATGGCGATAATAGCACAGCTAAGGACAATTTAGTATTTCTGTTGAAGTGGTTTGAGCGTTTCCCTCAATACAGAAGAAACGACTTTTTAATTAGTGGTGAGAGCTATGCAGGGCATTACGTTCCTCAACTTAGCCAAGCTATTGTTAAGTACAACTCAGCTACTAAAGAACAGGCTATAAATCTGAAAGGTTTCATGGTAGGGAACGCTCTGACGGATGATTATCATGATCAATTAGGGATGTTTGAGTTTATGTGGTCAAGTGGTTTGATTTCGGATCAAACGTACAAGCTTTTGAACCTACTTTGTGATTTTGAGTCAGTTGAGCACCCATCACATTCGTGTGAAAAGATTTGGGAAATTGCTGATAAAGAACTTGGAAATATAGACCCATACAGTCTGTTTACACCACCATGCCATGCCAATGTCAGTCAGTTAAGTCGGCTGGTGAGAAGAAAGAATAGAATTGGTAGACTCGGTCTCAGTGCAGAGTATGATCCATGCACTGAAAGGCACTCCATTGTATACTTCAATCGACCTGAGGTCCAAACAGCTCTTCACGTTGATCTAGATCATAAGCCTGCCACATGGGAGACCTGCAGTGATGTGGTATATACAAACTGGAAGGATTCTCCAAGATCAGTGCTCGATATTTATCATGAACTTATTGGCATGGGACTGAGGATATGGGTGTTCAGTGGTAATACGGACGTGGTAATACCTGTCACGTCTACTCGCTATAGCATAAGTGCTCTGAAACTCCCAACCTTGAGTCCTTGGCGTGCATGGTACGATGATGGGGAGGTAGGAGGATGGACCCAAGAATATGCTGGCCTTACGTTTGTGATTGTAAGGGGTGCAGGGCATGAAGTTCCTCTGCATAAACCAAAACTTGCTCTCACACTCGTCCAAACCTTCTTGGCAGGAACATCAATGCCCAATCTTGACTTACTCAGCACCTCTTGA 1419 0.4531 MAQSRSGILCLATLLLCSAFATSFSTDPPLLQQHKDRVGRLPGQNFNVSFAHYAGYITVEENAGRTLFYWFIEALEDPHSKPLILWLNGGPGCSSIAFGQSEEIGPFHINSDGKALHPNPYSWNRVANVLFLDTPVGVGFSYSNNGSDLLNNGDNSTAKDNLVFLLKWFERFPQYRRNDFLISGESYAGHYVPQLSQAIVKYNSATKEQAINLKGFMVGNALTDDYHDQLGMFEFMWSSGLISDQTYKLLNLLCDFESVEHPSHSCEKIWEIADKELGNIDPYSLFTPPCHANVSQLSRLVRRKNRIGRLGLSAEYDPCTERHSIVYFNRPEVQTALHVDLDHKPATWETCSDVVYTNWKDSPRSVLDIYHELIGMGLRIWVFSGNTDVVIPVTSTRYSISALKLPTLSPWRAWYDDGEVGGWTQEYAGLTFVIVRGAGHEVPLHKPKLALTLVQTFLAGTSMPNLDLLSTS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02342 472 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Phco7g02342 472 Gene3D alpha/beta hydrolase 33 292 IPR029058 -
Phco7g02342 472 FunFam Carboxypeptidase 32 292 - -
Phco7g02342 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Phco7g02342 472 Gene3D - 366 460 - -
Phco7g02342 472 FunFam Carboxypeptidase 316 463 - -
Phco7g02342 472 Pfam Serine carboxypeptidase 42 459 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 447 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Phco7g02342 472 FunFam Carboxypeptidase 366 460 - -
Phco7g02342 472 SUPERFAMILY alpha/beta-Hydrolases 38 463 IPR029058 -
Phco7g02342 472 Gene3D - 319 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02342 Phco-Chr7 41106509 41112971 Tandem