Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02336 ATGCCAGATTTAGGGAACTTGTCTCTGTCTTCGACTCTCACACTCTCTCACTGCTCCTCTGATGTCGCAGACACTCCCGTCAAAACCCTACCCGATGCCTTCGGTTCGGAGCCTGCCTTCGAGCCTCGGGTTTTGAAGCGCACCCGCGGCTCCCTGGATCGGGTCAAGAAGCCCGCCTCTGACAAAGCCTTCCAGGACCGCCTCAAAGATCCCTTCTCTCATCCATTTCTTGTTGGCGCTCCCAAGATGGAGGAATGTTGTTTTTGCCGCCATTTTATCTACCCTGGGGAGGAGGTAGTGTGTTCGGTTCGCGGATGTGACGCGCGCTGCCATTCTGAATGTGTAAAAGATTCTGTTGGAGCTACCAGTCTGAAAAAATACAAGTGTCCACAGCATGTATGCTTCATTTGCAAGCAAAAAAAGCACTTGAGGTGTGTACGATGTAAAATTGCGTTCCATAATAAATGTGCACCATGGCCAGATGCAGTGTTGCTGCTAAAAGATCATCCTGGTCTAGCTGTTTGCTGGAGGCATCCTTCTGATTGGCGCTTGGATAGGAAGCCGGATACTTCATCAAGTGACATTTCGGAAGTATTTTGTCGCTTGCCCCTTCCATTTATCACTGAGGAGTTTAAGATTGATTCCTCCTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTACACATAAGACGCAATATATACTTAGTAAAGAAGAAACGTAGTAATGTGGATGATGGTGCGGGGTGCACCAGTTGCAGTTCTACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGTTGCTCAAAAGCATGTCGCTGCTCTGAAAATTGCAATAATCGTCCATTTCGCAAGGAGAAAAAGATCAAGATAGTCAAGACTGAACATTGTGGATGGGGAGTGGAGGCCGCTGAAACCATTGATAAAGGTGGATTTATAGTTGAGTATATTGGCGAAGTAATTGACGATGCTTTATGTGAGAAGAGGCTCTGGGACATGAAATACATGGGTGTACATAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATCGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGCGATCCCAACTGTGTTTTGGAAAAGTGGCAAGTAGATGGCGAAACTCGTGTGGGTGTATTTGCTGCTCGTTCAATAGAAGCTGGAGAGCCATTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTTAAATGCAACTGTGGTGCAGCAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATTGGCAAGCTAGATTTCTGTTGGGGTTCTAAACGCAAGCGAACATCAAATGCTTGCATTACGCTGGTAACAGCCCTATGA 1386 0.4545 MPDLGNLSLSSTLTLSHCSSDVADTPVKTLPDAFGSEPAFEPRVLKRTRGSLDRVKKPASDKAFQDRLKDPFSHPFLVGAPKMEECCFCRHFIYPGEEVVCSVRGCDARCHSECVKDSVGATSLKKYKCPQHVCFICKQKKHLRCVRCKIAFHNKCAPWPDAVLLLKDHPGLAVCWRHPSDWRLDRKPDTSSSDISEVFCRLPLPFITEEFKIDSSWKDMDSKMEQPPPYVHIRRNIYLVKKKRSNVDDGAGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKKIKIVKTEHCGWGVEAAETIDKGGFIVEYIGEVIDDALCEKRLWDMKYMGVHNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEAGEPLTYDYRFVQFGPEVKCNCGAANCQGFLGTKKKIGKLDFCWGSKRKRTSNACITLVTAL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02336 461 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 460 IPR025787 -
Phco7g02336 461 Gene3D SET domain 203 442 IPR046341 -
Phco7g02336 461 SMART set_7 292 415 IPR001214 GO:0005515
Phco7g02336 461 ProSiteProfiles Post-SET domain profile. 415 431 IPR003616 -
Phco7g02336 461 SUPERFAMILY SET domain 216 421 IPR046341 -
Phco7g02336 461 SMART PostSET_3 415 431 IPR003616 -
Phco7g02336 461 FunFam Histone-lysine N-methyltransferase 206 441 - -
Phco7g02336 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 181 IPR013083 -
Phco7g02336 461 ProSiteProfiles AWS domain profile. 249 292 IPR006560 GO:0005634|GO:0042054
Phco7g02336 461 PANTHER SET DOMAIN PROTEINS 57 449 - -
Phco7g02336 461 ProSiteProfiles SET domain profile. 292 409 IPR001214 GO:0005515
Phco7g02336 461 CDD SET_ASHR3-like 293 431 - -
Phco7g02336 461 Pfam SET domain 303 408 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02336 Phco-Chr7 41029654 41039791 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco7g02336 SET 8e-18 No_clan