Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02335 ATGGAAGAGGAAGAAGCAACGCAGCAACGCCTCACCCACTCCTCCCTAACCACCCATTCACTCACCTCCACTGCTTCCGATGAAGAGCTACTCCACTCGGAAACCCTACTTCTGCATTCTTGTGACCTTCCGCACCACAACGCTGCTCATATGCAAAGAAACTCTACCGCACGTGAGATTGGCCAAGATGAGAGTAAGGAGTCAGCTCAGCATTCTAATGAGGAAACTATTGTAAAGGAGACAGTTGAGGCACCTCAAAAACAAACAGAAAATCAACTTCAGATGTCCGTTTGTTCAACTTCATTATCTAAACTATCACCAACTTCTGTATCACAGTATTTATCATCTGCCCCTAGTCCAGTTGTAACAGAACAGAGACCATCTCCTCCTAAGGCTAATAGTGTAAAAGTGCCAAAAGTGGACAAAGGTAGTCCTTCTGGTGGTACAACCGTATCTTCTGTTTCTGTTGCGAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGTTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTCTGTGACCATTCAGGACATGTGATAGAGATTGTTTACAAAAGTCAACATAGTCATGATCCCCCACACAAAATTGATTCAACTAAGGAATGTAAATTCCTGCCTTACAGTGAACCTAAAATGAAATGCAGTGTTCCAAAGCAGTCTAGCAGAGTTCTGAATGATTCTGATCCATCATCTTCTCCAAAAGAACCTTTATATGAATCACCTTGCAGTGCTAAAAGGAATCTAGAAAACTCATCTAATGGTGAGAAGGGTAAAGTTTTTTTGAAGGAAGAGCATGTTAATGACCCCAAGCCAAAAAGAAGGCAAGTTGCATATGAATTAATTTTCTTCATAGGAAAATTGAACAAAGGTGATGATTTAACATGCTTGGATTCAGCAATAAAACCTGGAAAGAAACCAAAGTTTGTTGTACATGCAGCAGAGGATATGGGGATATCAAGTGATGGATACCGATGGCGCAAATATGGACAAAAATTGGTGAAGGGAAGTCCACATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAACACAAAAGCTCTCATTATAACATACAAGGGAGTGCATGATCATGACATGCCTGTGCCCAAGAAACGACATGGTCCACCAAGTGCTTCCCTTGTGGCTGCAGCAGCTCCTGCTTCAATGAGCAATTTGCAGCTCAAAAAAACTGGTTTGATACAAAACCAGGAAAGTTCTGCTCATTGCTCGGAGGACACAGAAGGAGAATTAACCGGGGAAGCGTTGGACCTTGAGGGTGAGAAAGCAATCGAGTCAGCTCGAACTCTTCTAAGCATAGGTTTTGAAATTAAACCTTGCTGA 1458 0.4259 MEEEEATQQRLTHSSLTTHSLTSTASDEELLHSETLLLHSCDLPHHNAAHMQRNSTAREIGQDESKESAQHSNEETIVKETVEAPQKQTENQLQMSVCSTSLSKLSPTSVSQYLSSAPSPVVTEQRPSPPKANSVKVPKVDKGSPSGGTTVSSVSVARASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDSTKECKFLPYSEPKMKCSVPKQSSRVLNDSDPSSSPKEPLYESPCSAKRNLENSSNGEKGKVFLKEEHVNDPKPKRRQVAYELIFFIGKLNKGDDLTCLDSAIKPGKKPKFVVHAAEDMGISSDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASMSNLQLKKTGLIQNQESSAHCSEDTEGELTGEALDLEGEKAIESARTLLSIGFEIKPC 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02335 485 Gene3D WRKY domain 331 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 Gene3D WRKY domain 147 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 MobiDBLite consensus disorder prediction 57 76 - -
Phco7g02335 485 Pfam WRKY DNA -binding domain 348 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 Pfam WRKY DNA -binding domain 163 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 SUPERFAMILY WRKY DNA-binding domain 341 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 SMART WRKY_cls 346 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 SMART WRKY_cls 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 MobiDBLite consensus disorder prediction 243 283 - -
Phco7g02335 485 MobiDBLite consensus disorder prediction 52 76 - -
Phco7g02335 485 FunFam WRKY transcription factor 332 407 - -
Phco7g02335 485 ProSiteProfiles WRKY domain profile. 156 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 ProSiteProfiles WRKY domain profile. 341 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 436 IPR044810 GO:0003700
Phco7g02335 485 MobiDBLite consensus disorder prediction 111 130 - -
Phco7g02335 485 SUPERFAMILY WRKY DNA-binding domain 159 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02335 485 MobiDBLite consensus disorder prediction 243 264 - -
Phco7g02335 485 MobiDBLite consensus disorder prediction 1 25 - -
Phco7g02335 485 MobiDBLite consensus disorder prediction 111 154 - -
Phco7g02335 485 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02335 Phco-Chr7 41009764 41016654 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g02335 WRKY 1.5e-22 CL0274