Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02333 ATGGCATCCATAGTTGTTGCCTCCTCCGCATTCTCTTCTACTCTCACTACTCAATTTCTCGTTCCTTCTTCCTCTTCTTCTATCTTTCTCAGAACACTCTCTCCAAGGTCTTCACCACCGTTACTGCGTCTTTCTCTCGCGTCACCACCACTGCGCAACCTCATGGCTTGCGCCAGCCTTGGCCTCACTCGCCCATCCAACACCGAAACCCCCAAGGTTTCTTTCGCGTCGAAGGAGGTTGACGTGGTGCAATGGAAAGGGGACCTGCTCGCGATTGGCGTCACGGAGAAGGACTTGGCGCCAAACGCCGAAGCGAGGTTCCAAAACGCGATTCTGAATGCCTTGGATTCCAAGTTGGGCGGGTTGTTGGGCCAGGCTTCCTCCGAAGAGGACTTCACCGGCAAACCGGGCCAGTCCGTAGTTCTCAGAATCGCTGATGGACTCGGATCCAAGCGCGTGGCCCTGCTCGGCCTCGGCGCTTCCGCCTCCTCCTTCGTCGCGTTTAAGTCCCTCGGTGAGGCTGTTGCCACTGCCGCCAAGTCCGCCCAGGCCGGCCACGTCGCCGTCGCGCTTGCCTCTTCAGACGCTTTTTCCGTGGAGTCTAAACTTAACGCAGCTTCTGCAATAGCATCTGGGACTGTGCTGGGAACTTTTGAAGATAACAGGTACAGGTCGGAGTCTAAGAAATCGGCACTTAAATCGGTGGATATTATTGGGCTTGGAGCTGGGCCTGAATTGGAGAAGAAACTTAAGTTTGCAGCAGATGTTTCTTCTGGAATCATTTTTGGAAGGGAGCTTGTGAATTCCCCGGCTAATGTGCTCACGCCAGGGGTATTGGCTGAAGAGGCATCAAAGATTGCTGCAACATATAGTGATGTTTTTACTGCCAAAATTTTAGATGCTGAGCAGTGCAAGGAATTGAAAATGGGGTCCTATCTTGGTGTTGCTGCAGCCTCGGCAAATCCTCCTCATTTTATCCATTTGTGTTATAAACCACCAACTGGACCTGTAAAAGTCAAGTTAGCATTGGTTGGAAAAGGTTTGACTTTTGATAGTGGTGGTTATAACATCAAGACAGGACCTGGCTGTTTGATTGAACTCATGAAATTTGATATGGGCGGTTCTGCTGCTGTTTTAGGAGCAGCAAAAGCTCTTGGTCAAATCAAACCCCTTGGAGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCTGGAGACATTCTCACAGCTTCAAATGGAAAGACTATAGAGGTTAATAACACAGATGCAGAGGGTAGGCTTACCCTTGCAGATGCTCTGGTGTATGCTTGTAACCAGGGTGCTGAAAAGATAGTTGACCTGGCAACATTAACCGGGGCCTGTATAATTGCTCTTGGATCCTCAATTGCAGGTGTGTTTACACCAAGTGATGACCTGGCAAAAGAAGTTTTTGAAGCTTCAGAAGCGAGTGGGGAGAAACTATGGAGGTTGCCATTAGAAGAAAGCTACTGGGAGTCAATGAAATCAGGAGTAGCTGATATGGTGAACACTGGTAGTCGTCCAGGTAGTGCTATTACTGCGGCTCTTTTCTTAAAGCAGTTCGTTGATGAGAAGGTTCAATGGATGCATATTGACATGGCTGGTCCAGTTTGGAATGAAAAGCAGCGCTGTGCAACAGGATTTGGTGTTGCTACTTTAGTAGAATGGGTTTTGAGGAACGCATCTTAA 1734 0.4873 MASIVVASSAFSSTLTTQFLVPSSSSSIFLRTLSPRSSPPLLRLSLASPPLRNLMACASLGLTRPSNTETPKVSFASKEVDVVQWKGDLLAIGVTEKDLAPNAEARFQNAILNALDSKLGGLLGQASSEEDFTGKPGQSVVLRIADGLGSKRVALLGLGASASSFVAFKSLGEAVATAAKSAQAGHVAVALASSDAFSVESKLNAASAIASGTVLGTFEDNRYRSESKKSALKSVDIIGLGAGPELEKKLKFAADVSSGIIFGRELVNSPANVLTPGVLAEEASKIAATYSDVFTAKILDAEQCKELKMGSYLGVAAASANPPHFIHLCYKPPTGPVKVKLALVGKGLTFDSGGYNIKTGPGCLIELMKFDMGGSAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDILTASNGKTIEVNNTDAEGRLTLADALVYACNQGAEKIVDLATLTGACIIALGSSIAGVFTPSDDLAKEVFEASEASGEKLWRLPLEESYWESMKSGVADMVNTGSRPGSAITAALFLKQFVDEKVQWMHIDMAGPVWNEKQRCATGFGVATLVEWVLRNAS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02333 577 PANTHER LEUCINE AMINOPEPTIDASE-RELATED 90 575 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 CDD Peptidase_M17 85 572 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 Gene3D Zn peptidases 247 577 - -
Phco7g02333 577 Pfam Cytosol aminopeptidase family, catalytic domain 263 569 IPR000819 GO:0006508|GO:0046872|GO:0070006
Phco7g02333 577 Hamap Probable cytosol aminopeptidase [pepA]. 75 577 IPR023042 -
Phco7g02333 577 SUPERFAMILY Zn-dependent exopeptidases 258 574 - -
Phco7g02333 577 PRINTS Cytosol aminopeptidase signature 341 358 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 PRINTS Cytosol aminopeptidase signature 403 424 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 PRINTS Cytosol aminopeptidase signature 365 386 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 PRINTS Cytosol aminopeptidase signature 425 445 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 PRINTS Cytosol aminopeptidase signature 453 468 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Phco7g02333 577 Pfam Cytosol aminopeptidase family, N-terminal domain 92 226 IPR008283 GO:0006508|GO:0070006
Phco7g02333 577 SUPERFAMILY Macro domain-like 75 259 IPR043472 -
Phco7g02333 577 Gene3D Leucine Aminopeptidase, subunit E, domain 1 50 246 IPR043472 -
Phco7g02333 577 FunFam M17 leucyl aminopeptidase 248 577 - -
Phco7g02333 577 ProSitePatterns Cytosol aminopeptidase signature. 429 436 IPR000819 GO:0006508|GO:0046872|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02333 Phco-Chr7 40986123 40995457 Dispersed/Wgd