Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02330 ATGACATTGGCATATTCATTCCCAACTCCTCAGGTTCACGCCTACCACAACCCCAACAGAAGAACCCACCTTCAGATAAAACGGAAGCCCAACCGAACACACCAATTTCTCTTAATACCAACTTCTTCGCCCTCATCGTTCCTCTTCTCTTGTTCCTCCTTTCCCCTCACCTATTCCGATGCAACCCTGCACTTTCGCCACCACCACCTCCTCTCCACGGATGGCAATTTTGTGGTCGAAGACCTTGCTGCCGCCGTCCAGGAGGACGCCAGCCCAACGCCGCCCAGGATCTTCATCCAGGAGCCGCCGTGGCTTTTCCTCAAGGGGTTGTTAATGCAGGAGGAAGAGATGAGGCGGAAGGAGGAAGAGATGAGGCGGAAGGAGAAAGAGAGGGAAAAGTACAATTTGCTGCGCCGTAGGCAGATTGAGGCGGAGACGGAGGCGTGGGAGAGGATGGTGGAGGAGTACAGGGAATTGGAGAGGGAGATGCGCCAGAAGATGCTGGCGCCCAATTTGCCGCACGTCAAGGCGCTCCTCTTGGGCTGGTTCGAGCCTTTCAGGAGTGTTGTGGAGGCTGAACAGAAAGCCCACCGCGCGCGCCCCAGGAAGCAGCAGGAATCTATTGCACCCCATGTCGACGACTTGCCGTCCGAAAAGGTGGCGGTGATTGTGATGCATAAGATGATGGCCATGGTGATGGAGAATGAGGAAGGCTGCGTTCAGCTTGTTCATGCCGCTGTTCATATTGGCATGGCGGTAGAACAGGAGGTTAGGATTCATAAGTTCATTGAAGGAAGAAAAAGTAGCCGGAGTAACAAGAGAGAGGCTGATGCTGAAGACAGTTTGGATAATGATAAAGAAAGACAAAGGAATCATTTGAAGAGTTTGATTAAAAAAAGTAGACTGAAAGAAGTGCAGATGATATTGAAAAAAGAAGAATGTAGTCCTTGGAGCCGGGACACGCAGGCCAAGCTGGGAAGTCGATTAATAGAATTGTTAGTTGATACAGCATATGTACACTCTCCTGTTAACCAGTTTGCTGATACTCCACCTGATATCAGACCAGCTTTCAGGCACTGTTTTAAAGTCGCACCATGGCATCCAGGGCAAAAGTTTTCGAAGAAGTATGGTGTTATACAATGTGATCCCTTGGTCCTAGTTGGGCTTGAACAATGTGCCAAGCATATGTTCATACCTTACATGCCTATGTTAGTACCTCCCAAAAAATGGAAAGGATATGACAAGGGTGGACACTTTTTCTTACCATCTTATATTATGCGTACTCATGGATCTAGAAAGCAACAAGATGTAATGAAGAGTGTGAAGGCAGCACAAATGCAAAACGTTTTTGAGGCCTTGGATATTCTTGGAAACACCAAATGGCGAGTAAATAAAAGAGTGCTTGGAGTTGTAGAGTCAATTTGGGCTGGAGGAGGTAACATTGCAGGACTGGTTAATTGTTCAGATGTTCCTTTACCAGATAAGCCACCTGTAGAGGATTTTAAGCTAATTCAGGAGTGGAAATGTGCTTTGAGGAAGGCGAAAAAAATTAATATGGAAAGACATTCTCTAAGATGTGACACTGAACTTAAGCTTTCTGTGGCAAGAAAAATGAAGGACGAGGAAGGCTTTTATTATCCACACAATCTTGACTTTCGTGGCAGAGCATATCCTATGCATCCTCACTTGAATCATTTAGGTTCTGATCTGTGTCGAGGACTACTTGAATTTGCAGAAGGGAAGCCACTGGGAAAGTCAGGACTAAGGTGGTTGAAGATACATGTAGCAAATTTGTATGCTGGTGGTATTGAGAAGCTGTCTTATGATGGCCGGTTAGGATTTATAGAGAATCATATTAATGATATAATTGATTCTGCTGATAACCCTATTAATGGAAATCGTTGGTGGTTAACTGCTGAGGATCCTTTCCAGTGCCTTACTGCTTGTATTAATCTATCAGAGGCATTAAAAAGCTCTTCACCAAATTCTTTTATCTCACATCTTCCAGTTCATCAGGATGGTTCGTGTAATGGCTTACAACACTATGCAGCGCTGGGAAGAAATGAACTGGAGGCTGCGGCAGTCAACTTAGTAGCAAAGGAGAAACCTGCTGATGTTTACACAGAGATTGCTGTTAGGGTTCATGATATAATGAGACGAGACAGCAACAAGGACCCAGATACTTTTCCAAATGCTTTGTTAGCAAAGGTGTTGATTGATCAGATTGATAGGAAACTGGTCAAGCAGACAGTAATGACTTCTGTTTATGGTGTTACTTTTATTGGGGCACGAGAGCAAATTAAGAGAAGATTAGAGGAGAAAGGTCTTATTAATGATGATAGACTTTTATATGCTGCAGCTTGCTATGCAGCTAAGGTGACATTGGCTGCCCTTGGAGAAGTTTTTGAGGCTGCACGTGGCATCATGAGTTGGCTCGGGGATTGTGCAAAGGTGATTGCTTGTGAAAATCAGGCTGTTTGCTGGACCACTCCTCTTGGTCTTCCTGTTGTACAACCATACTGTAAAACTGAACGTTATCAGATAAGAACATCTCTTCAGCTTTTGGCTTTGCAGAGGGAGGGGAGTGCTGTATCTGTCAAGAAGCAGAGAAGTGCATTTCCTCCTAACTTTGTACATTCATTGGATAGTTCGCACATGATGATGACTGCTCTAGCCTGCAATGATGTTGGATTATGTTTTGCAGGGGTTCATGATTCATTTTGGACACACCCGTGCGATGTTGAGAAAATGAATCAAATTCTGAGAGAAAAGTTTGTGGATCTTTATAACATGCCTATACTTGAAAATTTGCTCGAGGGTTTCCAGACTACATATCCAGGATTGGCTTTCCCATCATTGCCAAAGAGAGGTGAGTTTGACTTAGAGAAGGTTCTTGATTCTCCGTACTTCTTCAACTGA 2919 0.446 MTLAYSFPTPQVHAYHNPNRRTHLQIKRKPNRTHQFLLIPTSSPSSFLFSCSSFPLTYSDATLHFRHHHLLSTDGNFVVEDLAAAVQEDASPTPPRIFIQEPPWLFLKGLLMQEEEMRRKEEEMRRKEKEREKYNLLRRRQIEAETEAWERMVEEYRELEREMRQKMLAPNLPHVKALLLGWFEPFRSVVEAEQKAHRARPRKQQESIAPHVDDLPSEKVAVIVMHKMMAMVMENEEGCVQLVHAAVHIGMAVEQEVRIHKFIEGRKSSRSNKREADAEDSLDNDKERQRNHLKSLIKKSRLKEVQMILKKEECSPWSRDTQAKLGSRLIELLVDTAYVHSPVNQFADTPPDIRPAFRHCFKVAPWHPGQKFSKKYGVIQCDPLVLVGLEQCAKHMFIPYMPMLVPPKKWKGYDKGGHFFLPSYIMRTHGSRKQQDVMKSVKAAQMQNVFEALDILGNTKWRVNKRVLGVVESIWAGGGNIAGLVNCSDVPLPDKPPVEDFKLIQEWKCALRKAKKINMERHSLRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGKPLGKSGLRWLKIHVANLYAGGIEKLSYDGRLGFIENHINDIIDSADNPINGNRWWLTAEDPFQCLTACINLSEALKSSSPNSFISHLPVHQDGSCNGLQHYAALGRNELEAAAVNLVAKEKPADVYTEIAVRVHDIMRRDSNKDPDTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFIGAREQIKRRLEEKGLINDDRLLYAAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIACENQAVCWTTPLGLPVVQPYCKTERYQIRTSLQLLALQREGSAVSVKKQRSAFPPNFVHSLDSSHMMMTALACNDVGLCFAGVHDSFWTHPCDVEKMNQILREKFVDLYNMPILENLLEGFQTTYPGLAFPSLPKRGEFDLEKVLDSPYFFN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02330 972 Gene3D - 581 659 - -
Phco7g02330 972 Gene3D - 459 541 IPR024075 GO:0003899
Phco7g02330 972 Pfam DNA-directed RNA polymerase N-terminal 140 458 IPR029262 -
Phco7g02330 972 FunFam DNA-directed RNA polymerase 690 879 - -
Phco7g02330 972 FunFam DNA-directed RNA polymerase 459 541 - -
Phco7g02330 972 FunFam DNA-directed RNA polymerase 120 457 - -
Phco7g02330 972 SUPERFAMILY DNA/RNA polymerases 127 972 IPR043502 -
Phco7g02330 972 PANTHER DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL 117 972 IPR002092 GO:0003677|GO:0003899|GO:0006351
Phco7g02330 972 ProSitePatterns Bacteriophage-type RNA polymerase family active site signature 2. 742 756 IPR002092 GO:0003677|GO:0003899|GO:0006351
Phco7g02330 972 SMART RPOL_N_2 139 458 IPR029262 -
Phco7g02330 972 FunFam DNA-directed RNA polymerase 581 659 - -
Phco7g02330 972 Coils Coil 107 162 - -
Phco7g02330 972 ProSitePatterns Bacteriophage-type RNA polymerase family active site signature 1. 669 680 IPR002092 GO:0003677|GO:0003899|GO:0006351
Phco7g02330 972 Gene3D - 116 458 IPR037159 -
Phco7g02330 972 Gene3D - 691 879 - -
Phco7g02330 972 Pfam DNA-dependent RNA polymerase 581 972 IPR046950 -
Phco7g02330 972 MobiDBLite consensus disorder prediction 266 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02330 Phco-Chr7 40922770 40944162 Dispersed/Wgd