Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02287 ATGGAAATGGGTCGTGTATTGTTGATGCTGTTGGTTTTTTCCACCATTGTTTTATACCCTTCTTCTCTTGCACTCCCTCAAGATGGACATATATTGTTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGCAACTGGAGAAAGTCTGATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCAGGGGAGCAACGAGTTCGCTCAATAAATCTACCTTATATGCAACTGGGGGGTATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCCCTTCATCAGAATGGCTTACATGGAGTTATTCCTAATGAAATTGGCAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGTGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACGTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGAAACTTAGATCTTTGTGGGCAGCAAGTTCAGAAACCTTGTCGGACATCACTTGGGTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCTAAAAGATCTTCACATTATGTCAAGTGGCTGTTAGTTGGTGCAATAACAATAATGGGGCTTGTGCTTGTTATAACACTTTCGTCGCTATGGATTTGCTTGCTATCAAAGAAGGAAAGAGCTGCTAGAAGATACGTAGAAGTTAAGGATCAAGTCAACCCAGAATCAAGTAGGAAGGATGATGGTACCAAACTTATCACCTTCCATGGTGATCTGCCATACACATCACTTGAGATCATAGAAAAGCTGGAGTCTCTTGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACTGTATACCGAATGGTGATGAACGATTGTGGTACTTTTGCTGTAAAGAGGATTGATAGAAGCCGGGAAGGTTCTGATCAGGGCTTTGAGAGGGAACTAGAGATATTGGGCAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTTTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACACTGAACAATCACTGAATTGGAGTACTCGCCTTAAGATAGCGCTTGGTTCTGCCCGGGGCTTGGCTTACTTGCACCACGACTGCTGCCCGAAAATTGTGCACCGTGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGATCCTCGTGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACCTTTGGTTATCTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGTTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTACCTTTGCAAGGAGAGGTGTAAATGTTGTTGGTTGGATGAACGCGTTCCTGAAAGAAAATAGATTGGAGGAGGTAGTAGACAAAAGATGCAGTGATGCAGATTCAGAATCTGTGGAAGTAATTCTTGAAATGGCAGCTAGTTGCACTGATGCAAATGCTGATGAACGTCCATCAATGAACCAAGTGTTACAGATACTAGAACAAGAGGTTATGTCTCCTTGCCCAAGTGACTTTTATGAGTCACACTCAGATCACTGA 1815 0.4231 MEMGRVLLMLLVFSTIVLYPSSLALPQDGHILLEIKSTLNDTRNFLSNWRKSDESHCTWTGITCHPGEQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDVGVLSTFGNNAFIGNLDLCGQQVQKPCRTSLGFPVVLPHAESDEAAVPAKRSSHYVKWLLVGAITIMGLVLVITLSSLWICLLSKKERAARRYVEVKDQVNPESSRKDDGTKLITFHGDLPYTSLEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMDPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFARRGVNVVGWMNAFLKENRLEEVVDKRCSDADSESVEVILEMAASCTDANADERPSMNQVLQILEQEVMSPCPSDFYESHSDH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02287 604 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Phco7g02287 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 586 - -
Phco7g02287 604 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02287 604 SUPERFAMILY Protein kinase-like (PK-like) 295 586 IPR011009 -
Phco7g02287 604 Gene3D Phosphorylase Kinase; domain 1 280 392 - -
Phco7g02287 604 SMART serkin_6 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02287 604 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 393 596 - -
Phco7g02287 604 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02287 604 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 187 - -
Phco7g02287 604 SUPERFAMILY L domain-like 25 208 - -
Phco7g02287 604 Gene3D Transferase(Phosphotransferase) domain 1 393 594 - -
Phco7g02287 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Phco7g02287 604 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Phco7g02287 604 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02287 Phco-Chr7 40237980 40241820 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phco7g02287 Pkinase 8.5e-49 CL0016