Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02264 ATGGCGTCGAGTATAGGGATGATGGATAGCGCATACTTTGTCGGCAGAAATGAGATTCTCACTTGGATCAACAATCGCCTTCAACTTAACCTCTCTCGCATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGATGCAAAGACAGAGTATGATATGATTCAGAATTACAAAGTTCTGCAGGATGTGTTCAACAAGCTGAAAATTGAGAAGCATATTGAAGTTGGAAGGCTAGTTAAAGGCCGACCTTTGGACAACTTGGAGTTCCTTCAATGGCTAAAACGTTACTGTGATTCTGTAAATGGAGGCATTATGAATGAGAACTATAATCCTGTTGAGCGTAGGGGTAGTAAGGGTGGAAACCGGAATGTCAAGGGTGTAAAGAGCTCAAAATCACTGCAAACAAATACTATGAACCATTCTGGTTCAGGCGACTCACTCAGTACGAACAGAACCTTTGGGTCGAAGCAATTGAGGTCAAGCGGAGGATCAGACGGGGCTAATGCTTCAGCTGATATTCAGGCTTTGTCCAAGCAGGTTTCTGATCTTAAACTGTCAGTGGATCACTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAGGCTTCAGAACTGGAGGAAGATCCTATGTCTCTGGCAATTAAGAAGATTTTGTATGCGGCTGATGCAAAGGGATCAGCATTAGATGAAGCTCAGGAATACCTTAATGAAGTCATCAATGGTGTTGAAGGTGAAGGTGAAGGTGGAGGTGAAGGTGAAGTTGAAGTTGAAGCAGAAACTGAAACCTGA 864 0.4271 MASSIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVGRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRGSKGGNRNVKGVKSSKSLQTNTMNHSGSGDSLSTNRTFGSKQLRSSGGSDGANASADIQALSKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQASELEEDPMSLAIKKILYAADAKGSALDEAQEYLNEVINGVEGEGEGGGEGEVEVEAETET 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02264 287 FunFam RP/EB family microtubule-associated protein 6 134 - -
Phco7g02264 287 Gene3D - 188 264 - -
Phco7g02264 287 MobiDBLite consensus disorder prediction 124 186 - -
Phco7g02264 287 Pfam EB1-like C-terminal motif 207 245 IPR004953 GO:0008017
Phco7g02264 287 Gene3D - 6 134 IPR036872 -
Phco7g02264 287 Coils Coil 190 210 - -
Phco7g02264 287 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 258 IPR027328 GO:0008017
Phco7g02264 287 FunFam Microtubule-associated protein RP/EB family member 1B 188 263 - -
Phco7g02264 287 MobiDBLite consensus disorder prediction 267 287 - -
Phco7g02264 287 MobiDBLite consensus disorder prediction 273 287 - -
Phco7g02264 287 MobiDBLite consensus disorder prediction 140 186 - -
Phco7g02264 287 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Phco7g02264 287 SUPERFAMILY EB1 dimerisation domain-like 190 248 IPR036133 GO:0008017
Phco7g02264 287 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 182 252 IPR004953 GO:0008017
Phco7g02264 287 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Phco7g02264 287 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02264 Phco-Chr7 39905785 39910718 Dispersed