Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02240 ATGGAGAATCAGCAACTCACTTTTTGGAATTCTAATTATGAAATTGATGAAAACTCATTTGCACCAACGTGCCAATTTTCTTCATATGATTATTTCAGGGGTAATGCTTGGGATGGGTTTCATTGGCCCTATGAATTTCCTCTTCAAGATAGCTATCTTGATGTTGTCCCATTCATGAAGTGTTATTATCCTCATGACATTTTGTTTGAAACTTTTCCGCTTGAACCAGCCCCACTAAGCTTTCAAGACTATGACTTCAGTGATATTAAAAATGTGCTTTCTGGGTGGAAAGAAATTGACTGTTCAGATCACAAACCGGCGTTTTCGTCAAGCAACGATGGCGAAAGTGTGAATGCAATGAGGGAAGAAGTGAAGGGTAAACACAACAGAGAAGAGAGAATTAGTGACAGTGCGAGAATGTTGTCAAGGAAAACCGTTTCTCAGTACTTCTACATGCCAATATCACAAGCTGCTAAAGAGCTTAATGTTGGTCTCACACACTTGAAGAAAAGGTGTAGGGAATTAGGTATTCAAAGGTGGCCACATAGGAAGCTAATGAGTCTTCAAACCCTTATAAAGAATATGCAAGAGCAAGGAGAGGGTGAGGGGCCTCAAAATGAAGAAAAAATAAGAACTGCCATTGAGATGCTGGAGAAAGAAAAAAGCATGGTGGAGGAAAGGCCAGATTTGGAACTTGAAGATAAAACAAGAAGGCTTAGACAAGCCTGTTTCAAGGCCAACTACAAGAAGAGGAAACTCATGGGCATGAGGTTCATGGAACCTCAACCTTCCCTTGGTGGCCTATTCGACAAGTATTGA 819 0.4054 MENQQLTFWNSNYEIDENSFAPTCQFSSYDYFRGNAWDGFHWPYEFPLQDSYLDVVPFMKCYYPHDILFETFPLEPAPLSFQDYDFSDIKNVLSGWKEIDCSDHKPAFSSSNDGESVNAMREEVKGKHNREERISDSARMLSRKTVSQYFYMPISQAAKELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNMQEQGEGEGPQNEEKIRTAIEMLEKEKSMVEERPDLELEDKTRRLRQACFKANYKKRKLMGMRFMEPQPSLGGLFDKY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02240 272 Pfam RWP-RK domain 141 188 IPR003035 -
Phco7g02240 272 Coils Coil 207 227 - -
Phco7g02240 272 PANTHER PROTEIN RKD4 125 255 IPR044607 GO:0003700
Phco7g02240 272 ProSiteProfiles RWP-RK domain profile. 124 209 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02240 Phco-Chr7 39562619 39563938 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phco7g02240 RWP-RK 3.9e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02240 7 39562619 39563938 Phco7g02240 7 39562619 39563938 ECH
Phco8g01341 8 13988072 13989275 Phco7g02240 7 39562619 39563938 PCT