Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02236 ATGCTCGAAAATAAGGACCCCGCAATTAGGCTCTTCGGCCAGAAGATTGCCTTTTCCGGAGAACCCGACGCTCGGACCATTGTCGCCACTGAAATCGCCTGGCCGCCGCCGCCGATGGATGTTGCCAGAGACGCTGAAGAAGAAGATGACGACTTTGCTGACTCAGAGACTGAAGATGATGAGAACAAAGACAAGGATCCTCCAGAAGAAGTTAGTGAGAAAACGAAAGAAGCTGATCTTCCTCCAAATGCTGCAGACTGTAAGAAGACCCCAGAGGGTATTCAGAATCCAAACACACCTTCCATAGACGAAGATTCTGCAAAGTCAAAATCCAACAAATCAGAAAACGATCAAACCGATCCAACCACAACAGCTTCTGCCACTACAACCAACTCTCAAGACAACAACAATAAAGCGCTGAAAAAACCAGACAAAATTCTTCCATGTCCTCGCTGCAATAGCATGGACACCAAGTTCTGTTACTACAACAACTACAATGTGAACCAACCACGTTACTTCTGCAAAGCGTGCCAAAGGTACTGGACCGCCGGGGGCACCATGCGAAACGTGCCGGTGGGTGCAGGGAGGAGAAAGAACAAAAACTCAGCCTCTCACTATCGCCATATCACAATCTCTGAAGCACTCCAAGCTGCAAGAATCGATTCCCCAAACGGGACTCATCTTTTGAAGCCCAATGGAAGAGTCCTCAGCTTTGGTTTAGACCCTCCAATTTGTGATTCCATGGCATCGGTCCTCAACCTCGCAGAGAAGAAAACAAGAAACGGGTTTCACTCCAACGAGGATCAAAGAAATAAAGATGACGATTGCTCAAGTGCATCATCCATTACCGTTTCCAATGAAGAAAGTGGGAAAAGCACGTCACAAGAATCATTGAGGCCAAACAACAACGGTTTCATACATCATCATCATCACCATGTTCCGTGCATCTCCACTGTTCCTTGGGCTTATCCTTGGAACTCCGGGGTTCCCTCAGCACCTGCTTTGTGCCCTCCAGGGTTTCCCATGTCATTCTACCCTCATGCATTTTGGAATATTCCATGGTTTCCCACACACTCACAGAACCATGCTGCTCCAGCTCCAAGGTCTCCGGGTTCTGGTCCAAATTCTCCTACTCTTGGGAAACACTCGAGGGACGATGATGTGGCGAGGCAAGAGCATCTGCACGAGGAACCGTCGAGGCAGAGAAACGGATCTGTCTTGGTGCCCAAAACTTTGAGAATCGATGACCCCAGTGAGGCTGCAAAGAGTTCTATATGGGCAACTTTAGGGATCAAGAACGAGTGTGTGAGTGGGGCTGGCATGTTCAAGGGGTTCCAATCAAAGAAAGATGAGAAAGACCGTGTCGTTGAAACCTCTCCTGTGTTGAGGGCCAACCCTGCAGCCTTGTCTAGATCCCTTAACTTTCATGAGAACTCTTGA 1440 0.484 MLENKDPAIRLFGQKIAFSGEPDARTIVATEIAWPPPPMDVARDAEEEDDDFADSETEDDENKDKDPPEEVSEKTKEADLPPNAADCKKTPEGIQNPNTPSIDEDSAKSKSNKSENDQTDPTTTASATTTNSQDNNNKALKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDSPNGTHLLKPNGRVLSFGLDPPICDSMASVLNLAEKKTRNGFHSNEDQRNKDDDCSSASSITVSNEESGKSTSQESLRPNNNGFIHHHHHHVPCISTVPWAYPWNSGVPSAPALCPPGFPMSFYPHAFWNIPWFPTHSQNHAAPAPRSPGSGPNSPTLGKHSRDDDVARQEHLHEEPSRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVSGAGMFKGFQSKKDEKDRVVETSPVLRANPAALSRSLNFHENS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02236 479 MobiDBLite consensus disorder prediction 67 83 - -
Phco7g02236 479 PANTHER CYCLIC DOF FACTOR 2 4 479 IPR045174 GO:0003700|GO:0006355
Phco7g02236 479 MobiDBLite consensus disorder prediction 276 302 - -
Phco7g02236 479 Pfam Dof domain, zinc finger 144 201 IPR003851 GO:0003677|GO:0006355
Phco7g02236 479 ProSiteProfiles Zinc finger Dof-type profile. 147 201 IPR003851 GO:0003677|GO:0006355
Phco7g02236 479 MobiDBLite consensus disorder prediction 116 137 - -
Phco7g02236 479 ProSitePatterns Zinc finger Dof-type signature. 149 185 IPR003851 GO:0003677|GO:0006355
Phco7g02236 479 MobiDBLite consensus disorder prediction 380 400 - -
Phco7g02236 479 MobiDBLite consensus disorder prediction 43 66 - -
Phco7g02236 479 MobiDBLite consensus disorder prediction 262 305 - -
Phco7g02236 479 MobiDBLite consensus disorder prediction 30 146 - -
Phco7g02236 479 MobiDBLite consensus disorder prediction 361 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02236 Phco-Chr7 39494555 39497088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco7g02236 zf-Dof 2.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01347 8 14042849 14045541 Phco7g02236 7 39494555 39497088 ECH
Phco4g01976 4 39223836 39226551 Phco7g02236 7 39494555 39497088 ECH
Phco7g02236 7 39494555 39497088 Phco7g02236 7 39494555 39497088 ECH