Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02229 ATGGAAAACGTTTCAGTTCTGTGTAAGGAAGATGTTCAGATGGATTTGCCTCCAGGGTTTAGGTTTCACCCAACTGATGAAGAGCTTATTAGTCATTACCTTTACAGAAAGGTAACTGAGACTCACTTCTCAGCTAGGGCCATTGGAGAGGTGGACTTAAACAGGTCTGAACCTTGGGAATTACCATGGAAGGCCAAAATGGGAGAGAAAGAATGGTACTTTTTCTGCGTGAGAGACAGAAAATACCCAACCGGTTTGAGGACCAACAGGGCCACTGAAGCAGGATACTGGAAGGCCACAGGGAAAGACAAAGAGATTTTCAGAGGGAAATCTCTGGTGGGAATGAAGAAAACTTTGGTTTTCTACAAAGGAAGGGCACCGAAGGGAGAGAAAACTGATTGGGTCATGCATGAATATAGACTTGAGGGTAAATTCTCTGTCCACAACCTCCCCAAAACTGCCAAGAGCGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGGTGTGAAGAAGACTCATATTTCTGGGATAATGATGTTGGACTCTTTCGGAAACGAATTGGCTTCTTCTGCTTTGCCACCTCTTACTGATTCCTCACCTTCCATTGGCAACACCAAAGCACTGAGTGTGACTGAACAGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCCAAGAGCGATCTTTGATTCCTTGAGCAACACCACCAACAACAACACCCTTTATGGGGTTTCTTCAAACCATTCATTTTACTCCACTCAAGGGGTTCACCTTCAGGCTCCACCAACTTTGCCATCACCCGGTTCTTCAAACCATTACTTTATTAGATCCTTCCTTCACAACCATGGAAAGGGATCACACTTGAGGAATGGCTTTGAATCAGAGAGGGAAATGGTCAGTGTCTCACAGGAAACAGGTGTTTCTGCTGATGTGAACGCTGAAACCTCTTCAGTTGTGTCAAATCTTGAGATGAGTAAAAGGCTCTTTGAGAATCAAAACAACGCAATTGGTTCAGCTGCACCAGCGGACCTAGCTAGCTTGTGGAACTACTGA 1059 0.4504 MENVSVLCKEDVQMDLPPGFRFHPTDEELISHYLYRKVTETHFSARAIGEVDLNRSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLEGKFSVHNLPKTAKSEWVICRVFQKSSGVKKTHISGIMMLDSFGNELASSALPPLTDSSPSIGNTKALSVTEQAYVPCFSNPIDVPRAIFDSLSNTTNNNTLYGVSSNHSFYSTQGVHLQAPPTLPSPGSSNHYFIRSFLHNHGKGSHLRNGFESEREMVSVSQETGVSADVNAETSSVVSNLEMSKRLFENQNNAIGSAAPADLASLWNY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02229 352 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Phco7g02229 352 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Phco7g02229 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 256 - -
Phco7g02229 352 FunFam NAC domain-containing protein 100-like 25 170 - -
Phco7g02229 352 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Phco7g02229 352 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02229 Phco-Chr7 39351585 39352868 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g02229 NAM 4.2e-39 No_clan