Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02220 ATGGAGTCTGGTGAGGAGATTAATTTGAATATAGAAAGTGGTGGTGGAAATAATGGGAAGAGTGGTGATGGGTTCATTGATAGAAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAACAGTTCTCAAGAGGTTTTCACACTTCTTTTGAGGTGTTCTTATCAGGTGACCTTAGTAAAGTCGCCGAGACAGGTAATTGATGCACTGAATGCAGAGGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCAACAAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGGGATAAAGAGTTTCGCAGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCTGCTGACTATCTAGTAAAGCCCTTACGTACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCGCATGCTTGGACTCGTAGAGAAGAACATCTTGAGTTATGAGTTTGATATTGTAGCATCAGACCCCAGTGATGCCAATACAAACAGTACCACTCTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCAACAATCCAGAGGTGGGATTATCAGTCCAACAAGAGCAAGAGTCTTCTATTGCAATTGGTGCTGCTGTTGAGGAACCTCTAGATGCTCATGCATCAGAACACAGGCCTGATGTGGAAGGATTTAATGATCACCGAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTTTTCACGTATGTTAAAGCATCTATACTGAAGAGCAACTTTGAAGGGGTTGTTAATGTAGACAACAATGGTGCTGCACATATGAGGATGGAAGCTATGCATCAAGCATGTGCTCAACAAGAGGTGAATGACCTTCAAACACGTGAAAATGGAGAGACCTGTGAAAGTCAATCGCAGGATGACTTACCCAGCTGCAGTAGTGTACCTGATTCTCTCTCTATTGAAAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACCGCAAAAGCACAGGGATAAAAATTTCCATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCTGAGCATGAAGTATCTGGCATGGCTTCCCAACATACGTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCTTCATCTGCACAAATGTATCACCAAAAGAATATGCAGGACCTACAGAATCATCATAGTGCAGCTATGATTGCTCAATACAGTCATCTTCCCCAAGGTGGTCCTCACGGAACGGGGATGACATCTTTCCCATACTACCCGATGAGTATATGCTTACAACCTGGTCAGGTTCCTCAACCCCATTCATGGCCATCATTTGGAAGCTCAAGTTCATCAGAAGCAAAATTAAGTAAAGTTGACAGGAGAGAAGCAGCACTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACAGGAAACGACTTGCTGAAAGGCGGCCTCGAGTGAGGGGACAGTTTGTCAGAAAATTAAACGGCGCCAATGTGGATCTCAATGGACAGCCTGCATCAATAGACTATGATGAAGATGATGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCTGAGGATGCTTGA 1683 0.432 MESGEEINLNIESGGGNNGKSGDGFIDRSKVRILLCDNDSNSSQEVFTLLLRCSYQVTLVKSPRQVIDALNAEGQHIDIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYEFDIVASDPSDANTNSTTLFSDDTDDKSKRSNNPEVGLSVQQEQESSIAIGAAVEEPLDAHASEHRPDVEGFNDHRTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNVDNNGAAHMRMEAMHQACAQQEVNDLQTRENGETCESQSQDDLPSCSSVPDSLSIERSCTPPASMEVSPQKHRDKNFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGGFNHVMMPSSAQMYHQKNMQDLQNHHSAAMIAQYSHLPQGGPHGTGMTSFPYYPMSICLQPGQVPQPHSWPSFGSSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGANVDLNGQPASIDYDEDDEEDEDDQGARDSSPEDA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02220 560 MobiDBLite consensus disorder prediction 455 476 - -
Phco7g02220 560 MobiDBLite consensus disorder prediction 226 252 - -
Phco7g02220 560 SUPERFAMILY CheY-like 27 156 IPR011006 -
Phco7g02220 560 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 300 IPR045279 GO:0009736
Phco7g02220 560 MobiDBLite consensus disorder prediction 179 208 - -
Phco7g02220 560 MobiDBLite consensus disorder prediction 309 346 - -
Phco7g02220 560 MobiDBLite consensus disorder prediction 525 560 - -
Phco7g02220 560 MobiDBLite consensus disorder prediction 536 560 - -
Phco7g02220 560 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Phco7g02220 560 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Phco7g02220 560 Pfam CCT motif 480 522 IPR010402 GO:0005515
Phco7g02220 560 ProSiteProfiles CCT domain profile. 480 522 IPR010402 GO:0005515
Phco7g02220 560 MobiDBLite consensus disorder prediction 226 249 - -
Phco7g02220 560 Gene3D - 31 236 - -
Phco7g02220 560 MobiDBLite consensus disorder prediction 455 472 - -
Phco7g02220 560 SMART REC_2 31 146 IPR001789 GO:0000160
Phco7g02220 560 MobiDBLite consensus disorder prediction 309 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02220 Phco-Chr7 39186722 39191509 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phco7g02220 Response_reg 2.7e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02220 7 39186722 39191509 Phco7g02220 7 39186722 39191509 ECH