Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02203 ATGTCCCAAGGATCTCCCCCGCAAGACAACAAAGAACCCTCGCCGGAACCCGATTCGCACAAGGAGGAAGCAACCGCCAACACCGCCGCCACCACCGCCGATGCTGCTCCTCCCGCCCCCACCCGGAACCGCCCCTCTCGCGCCTGTACCATTCGCACGGCTGCACGCCTGTACACGGCGTCGCAGCCGGCTAGGCCGAAGGCCGCGAAGAGGGAGACTCGCCGCGAGGAGTCGCCGGCGCCGCCGTCTCCGCAACCGCAGCAATGCGGCAAGATCGTGACGCCGCTGGTAGAACCGCCCTCGCCGGCGCAGTTGCCGCGTTACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTTTTTAGGCATCTTTTGAATATTTCAGTAGAATTCTCGGCTGAAGAGTTTGAGACTGCTTTACTCACTCCCAATGACACATTGGGTGATATACATATGCCTTTGCTAAAGGCAATTCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTAAGAGATTGGTGGCACTGGGTTGCGGATGGGGACCTTCCTATTGTTGCTTCACATGGAGTGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAGTTCAATCAAACATGGCATTCCTCTTTCAACATTTCGTAAGGATCGTATTGGTGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCAAAATATTGGTCATAGGTTGTATCGTGAGATAAGGAAAACTGAGGTGGTTCAAATGAAAAAAGGGAAACCAAGAGGTTCCCAGGCTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCTGGATGTTTCTGAGAAACTTTTCACAAGTAAAAACAGAACGGAGGTTTCTGTGGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAGGTTCACAAGAGAAAGGAGAGGTTGATGAAAAAACAACATAGACAAGCTCTTCTTCTTGATAATTTCTTAGGTGTTGATGGGCTTGCCCTAGGGCGTTCACTACGCGATAGGAAACCTGTTACCTACACTTTCGATGATTATGATCGGTCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACTTTTACCGAGGAGAGAAGCAGGATCAAAACCTGAAGCTTTATCCAATGGTAAATGGAGTGGTCCTTCTCCTTCGCATGACCCTCAAGATCTAAATTTTGGCACGCTGTCTCCAAAATCACCAGACTTCGATGATATGGAGGAAGATAATCAAACTGACATACTGGACTTGGATAGAAGCAATCGACGAAGACAGAAGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCGTTGTCGGATAATGAGGCTGACTATGATAGTGATGATGATATTGTGGGAGAAGCCGTGTACTCTGAAGAGTATCTCCAGAAACGCAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGCTCTGAAGGAGATGAGGAATATAATTGGAATGAAGATAATGTTGAAGATGAAGAAGAAGATGATGAAGAAGATTCCATGAGTGTCAGTGAGGATAGTGACAAGCCCCGAAAATTCAAGCGACTGGCAGGCCGAACTAGGAGGGAAACTAAACTCAGGTCTGTGGATGAGATTCAATCAGGTCTAAGGCGCAGTAAGAGGGCAACACAAAAACGTATAAATTACCGGCAATTAGAGATGTCGGATTCAGAAACCGAGTTCATTAAACCTGACAAGTCTAATGCATCAGATGATCACTCCGATCCTACTGAGAATGGAGAGTATATGATGGAAAGTGAAGATTCAGATGGCAACGATGATGAAGAACAAGAAACCAAAGATGTGGAGCCTGTTACTTACCCTGCAGAAGGGAACAACCAATATCCTGCTGTAGAGGAGAATGAACAAAGCCAAATCCAGCCTCCTGAAAAATCTAGGAGTCCAGGTCAGGAGGAAGTTGAGGGCACCACAAAGCGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTCGATGATGGTCCAAATACAACAGCCAAAGATGATGAAGGCAATGGTGATTTGTGA 2205 0.4608 MSQGSPPQDNKEPSPEPDSHKEEATANTAATTADAAPPAPTRNRPSRACTIRTAARLYTASQPARPKAAKRETRREESPAPPSPQPQQCGKIVTPLVEPPSPAQLPRYNLRSMWELASILNFLNLFRHLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGVEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDSSIKHGIPLSTFRKDRIGGDSHGVSYWYEDDQNIGHRLYREIRKTEVVQMKKGKPRGSQAFSNTTYQWETVATNFDEFLDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLALGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPELLPRREAGSKPEALSNGKWSGPSPSHDPQDLNFGTLSPKSPDFDDMEEDNQTDILDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYSEEYLQKRKQRRKASSSSGSEGDEEYNWNEDNVEDEEEDDEEDSMSVSEDSDKPRKFKRLAGRTRRETKLRSVDEIQSGLRRSKRATQKRINYRQLEMSDSETEFIKPDKSNASDDHSDPTENGEYMMESEDSDGNDDEEQETKDVEPVTYPAEGNNQYPAVEENEQSQIQPPEKSRSPGQEEVEGTTKRRFLDLNELAPSSGFDDGPNTTAKDDEGNGDL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02203 734 MobiDBLite consensus disorder prediction 468 490 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 673 689 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 1 98 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 579 595 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 608 637 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 406 490 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 691 705 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 515 734 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 515 532 - -
Phco7g02203 734 Pfam DDT domain 118 163 IPR018501 -
Phco7g02203 734 MobiDBLite consensus disorder prediction 638 657 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 537 560 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 431 451 - -
Phco7g02203 734 MobiDBLite consensus disorder prediction 406 422 - -
Phco7g02203 734 PANTHER REMODELING AND SPACING FACTOR 1 41 728 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02203 Phco-Chr7 38904609 38912459 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phco7g02203 DDT 3.9e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01288 8 13491123 13498260 Phco7g02203 7 38904609 38912459 PCT