Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g02184 | ATGTCTGCCGTCGGTGATGTTTTCATGCCGGAAGTGGGTGCCGGGAAGCTACACGTGCTTGCCGTTGATGACAGCCACGTGGACCGCAAGGTTATTGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGAAGCAGGGCCCTGCAGTATCTGGGGTTGGATGGAGAGAAGAGCTCCATTGGTTTTGATAGTGTGAAGGTTAATTTGATAATGACAGACTACTCCATGCCGGGGATGACAGGATATGAATTGCTCAAGAAGATAAAGGAATCATCTGTGTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAATTGTCAGATGTAAAACGCGTGACAGATTTCATCATGAAAGGCGAAGGGAAGAAAAGTGTAAAAAAAAGCCATAAAAGAAGTAGATCAGATGATTGCACCCCTCCATCTATTTCAACTGCATTCTCATCAGTTTCTCATCCATGTGATGTATCATTGCCTGCATCGCCTTCTACATTTCACTCAAAGAAATCCAGATTGAGCATATAG | 606 | 0.4455 | MSAVGDVFMPEVGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMKGEGKKSVKKSHKRSRSDDCTPPSISTAFSSVSHPCDVSLPASPSTFHSKKSRLSI | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g02184 | 201 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 17 | 157 | IPR045279 | GO:0009736 | |
| Phco7g02184 | 201 | Gene3D | - | 16 | 168 | - | - | |
| Phco7g02184 | 201 | Pfam | Response regulator receiver domain | 19 | 138 | IPR001789 | GO:0000160 | |
| Phco7g02184 | 201 | SUPERFAMILY | CheY-like | 16 | 145 | IPR011006 | - | |
| Phco7g02184 | 201 | ProSiteProfiles | Response regulatory domain profile. | 18 | 145 | IPR001789 | GO:0000160 | |
| Phco7g02184 | 201 | CDD | REC_typeA_ARR | 19 | 140 | - | - | |
| Phco7g02184 | 201 | SMART | REC_2 | 17 | 141 | IPR001789 | GO:0000160 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g02184 | Phco-Chr7 | 38718808 | 38720716 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | Others | Phco7g02184 | Response_reg | 7.2e-21 | CL0304 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco7g02184 | 7 | 38718808 | 38720716 | Phco7g02184 | 7 | 38718808 | 38720716 | ECH | |
| Phco8g01268 | 8 | 13273194 | 13275023 | Phco7g02184 | 7 | 38718808 | 38720716 | PCT |