Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02145 ATGAAGAGGAGATTAGCAAGCGCCAGCGATGATTCCACTAAACTTGATCGCAAAACCATCGAAAGAAACCGCAGAATCCACATGAAATCTCTCTGCCATCAGCTTGGCTCTCTTATTCCTCCCAACCTCAAACCACCCAAATCCAAGCTGATGCTAGGGCAGCAGGACCAGCTGGATCTTGCAGCAAGGTATATCAAACACATGAGAGAGAGAATAGAGAAATTGAAGAGGCAGAAGGAGAAAGCCATGTCAGACCGAAGCAGTGATAGAAAAATGTTGGATAAAAACGTTGCCACCAAGTTGCCGGTACTGGAGCTGAGAGACTTGGGTTCCGGCATCGAAGTGATGCTGGTGAGTGGGTTGAACAAGACATTCATGTTGTACGAAGTAATCAATGTTCTTGAGGAAGAAGGTGCTGAAGTTGTCACAGCAAGCTTCTCAACTGTCGGTGACAAGATATTTTACGTTGTTCACGCTCAGGTTAAAATATCAAGGGTTGGAGTGGAGACCGCAAGGGTAAAGGATAGACTTCAAGAATTTATTGCCCCATTAGAAATGTGGCCGGAAGACATGTGA 576 0.4549 MKRRLASASDDSTKLDRKTIERNRRIHMKSLCHQLGSLIPPNLKPPKSKLMLGQQDQLDLAARYIKHMRERIEKLKRQKEKAMSDRSSDRKMLDKNVATKLPVLELRDLGSGIEVMLVSGLNKTFMLYEVINVLEEEGAEVVTASFSTVGDKIFYVVHAQVKISRVGVETARVKDRLQEFIAPLEMWPEDM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02145 191 Coils Coil 58 85 - -
Phco7g02145 191 SMART finulus 18 74 IPR011598 GO:0046983
Phco7g02145 191 FunFam Transcription factor bHLH162 5 97 - -
Phco7g02145 191 Gene3D - 5 85 IPR036638 GO:0046983
Phco7g02145 191 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
Phco7g02145 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 180 - -
Phco7g02145 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 83 IPR036638 GO:0046983
Phco7g02145 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02145 Phco-Chr7 38064320 38065432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco7g02145 HLH 5.8e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02145 7 38064320 38065432 Phco7g02145 7 38064320 38065432 ECH