Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02131 ATGGGTTTATCTTCTTTGCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCCTCGGGGGACATGCTTACATGCTCAAGGCCCATGCTAGAGAGGAGGCTAAGACCCCCTCATGACCAAGCTCTAAAGTGCCCCAGGTGTGAGTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGCTGCAGAAAGAACAAGAAAGTCTCTGCCAAAAAATCCAATGACCACCAATTAGTTAACAATCAAATTAGCCAAACACAGCCCCCACCCTACCATCACAACTCCAAAGACCTTCAACTCTCTTTTCCAGATGTACAATTTTCCCACCTCAGCAACTTGCTTGGGACCAATGCAGGGGCACTGGGAAACCCTAGCTTCATGGAGAGCAAGTATGGTATTGGCATGATTGAGAACCCAAGGCCAATTGACTTCATGATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAATAGTGATATGGGTATGGGTGCTGGGCTAGGAGATATGAATGGTACTGCTCAAAATGGGTTGCCACCAAATTTTCATGGTCTTTGCTCCCCAGCCTTTGGAAGCATGTCTATGTCCCTTGACGGCAACAACACCGGCAATGGTGCTAATAACTACTTAATGGACTCTTGCCAACGCTTGATGCTGCCTTATGATGCCAATGAGGACCATAATGCCTCAATTGATGTGAAGCCAAACCCTAAGCAACTATTGTCCCTCGAATGGCAAGACCAGGGTTGCTCTGATGCAGGCAAAGACTCATTTGGATATCTCAACGGTCCAGGATCATGGTCTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA 1011 0.4698 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMLERRLRPPHDQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHQLVNNQISQTQPPPYHHNSKDLQLSFPDVQFSHLSNLLGTNAGALGNPSFMESKYGIGMIENPRPIDFMMESKLEGIIGSSSSRNFDFFGNSDMGMGAGLGDMNGTAQNGLPPNFHGLCSPAFGSMSMSLDGNNTGNGANNYLMDSCQRLMLPYDANEDHNASIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWSGMMNGYGSSTTNPLV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02131 336 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Phco7g02131 336 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Phco7g02131 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 201 IPR045174 GO:0003700|GO:0006355
Phco7g02131 336 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02131 Phco-Chr7 37659562 37661032 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco7g02131 zf-Dof 2.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00550 8 5454027 5454725 Phco7g02131 7 37659562 37661032 PCT