Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02116 ATGGACAATTTCCTTTATGGAAATTCTCAAAGGAATATTGAACTAGATATCATGGTTTCAAATCAAAGCTTTTTGCCTTTTACTCCTCAACAAATCAAGCCCTCCAATTTTGTTTTACCAGATGAAGTTTCATGCATATCACCCATCAATTATTACAAAACAACTGGCGTTAACAAAATCCATAGATCCTATCCAACCACTCGAAGAACATTCAAAGTTCACAAGAAGTCCAAAACAGTGAAGGGGCATTGGACAATAGAAGAAGATGGATTATTGATTCAACTGGTGGAACAATACGGGTTGAGGAAGTGGTCTCATATTGCTAAGATATTGCCTGGAAGAATTGGAAAACAGTGCAGAGAGAGATGGCATAACCATCTAAGGCCTGATATCAAGAAGGACACATGGAATTGTGAAGAGGATAAAATACTAATCGAAGCTCATGCTGAGATTGCTAAAAGGTTGCCTGGAAGAACTGAGAACTCGATCAAAAACCACTGGAATGCAACCAAGAGAAGGCAATATTCCAAAAGAAAGTGCCGATCCAAGTACCCTAGAGGCACTCTTCTACAAGAGTATATCAAGAGCTTGAACTTAGACAAGAACCCCCCAAGAGATTATAGGAGAAAATCTTGTGCTAATTATGCTACTCCCATGAATATCAAAACCAGCACAAGCAAAGCCACTGCACCCCAGACAGTTTTTCAATTTTGTGCCACTGAATGCTTGGCACCAAATTCTGATTTCAATGTGGTTCCAGATTTTCTCTTTGGTGAGAATTTGTTTGAAGAAGGATGCTGTATCGATTCTCTTCTAGATGGTGTGCCTTGTGTTCCTCTTGAGAATAACAAAATTTTTGAAGGAAAATTGCAATTTGATGGAATGATGGAGGGAATAAAACACTGTGGTTATGGAGGAATAGAATGTGTTGCAGGTGTTAGTATGGATGAGAATGATATTGAGAGAGATATGGCACTAGAGATGTTGGAGGTTGAAGTTAAGAAGGAGCTGGATTTGGTTGAGATGATCTCTCAGATTAATAATGAAACTTTTTATGTGTAA 1062 0.3832 MDNFLYGNSQRNIELDIMVSNQSFLPFTPQQIKPSNFVLPDEVSCISPINYYKTTGVNKIHRSYPTTRRTFKVHKKSKTVKGHWTIEEDGLLIQLVEQYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKKDTWNCEEDKILIEAHAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTLLQEYIKSLNLDKNPPRDYRRKSCANYATPMNIKTSTSKATAPQTVFQFCATECLAPNSDFNVVPDFLFGENLFEEGCCIDSLLDGVPCVPLENNKIFEGKLQFDGMMEGIKHCGYGGIECVAGVSMDENDIERDMALEMLEVEVKKELDLVEMISQINNETFYV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02116 353 PANTHER MYB PROTEIN-RELATED 81 219 - -
Phco7g02116 353 ProSiteProfiles Myb-like domain profile. 128 184 IPR001005 -
Phco7g02116 353 FunFam Transcriptional activator Myb isoform A 80 133 - -
Phco7g02116 353 CDD SANT 135 171 IPR001005 -
Phco7g02116 353 ProSiteProfiles Myb-like domain profile. 76 127 IPR001005 -
Phco7g02116 353 SUPERFAMILY Homeodomain-like 81 172 IPR009057 -
Phco7g02116 353 CDD SANT 84 127 IPR001005 -
Phco7g02116 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 131 IPR017930 -
Phco7g02116 353 Gene3D - 80 132 - -
Phco7g02116 353 SMART sant 80 129 IPR001005 -
Phco7g02116 353 SMART sant 132 173 IPR001005 -
Phco7g02116 353 Pfam Myb-like DNA-binding domain 84 142 - -
Phco7g02116 353 Gene3D - 135 188 - -
Phco7g02116 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 175 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02116 Phco-Chr7 37245164 37246521 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g02116 Myb_DNA-bind_6 1.9e-18 CL0123