Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02103 ATGGGTATGAATATAAAAGGAGAAATAGAGAGGGTAAATGGGAAGGAACTGAGTTACAGTGAATTTGTGGAGAGATATATGGAGAAGAACAAACCCGTGGTGCTCACTGGGCTAATGGACCCTCATAATTGGAGAGCTTGCACTGATTGGGTCACACTTCATTCCCAACCCAACTTTCAATTTTTCTCCACTCTTTTTGGAGCTTCTAAAGTTCAGGTTGCTGATTGTGACACCAGAGAATTCACTGATCAGAAAAGAGAGGAGATGTTGGTCTCCGATTTTATTGCGCGTTGCCTTCATCTTGGTGAGGCTTCTGCTGTTCAGTGTAATGGTGAAACTTGTGCAAGTAACGGTGCCTCTGTATCAGTACCGTATTTGAAGGATTGGCATTTTGTTAAGGAGTATCCTGAATATGTAGCATATGACACTCCAAGGTTCTTTTGTGATGACTGGCTCAATCTGTATCTTGACAACTTCAGAACCCATATTGATTCTGACACAGAGCAACCAAATGAGGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGTGAAAGGATCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCCTACAGCTGGTCGGCAAATGTCTGTGGAAAGAAGAGATGGCTTTTTCTAGATCCTTCCCAATGTCATCTTATATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCAAACTCGAAGTTTCCTGGTTTTAGCGAGGCTATCTGGTTAGAATGCACACAAGATGCTGGTGAAATTATATTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAATTGGTTCAACGCTTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTATGCCAGCGCAATCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACGTTCATGTCATACTTCACATTGGCCAACTTGGTGTTGCTTCGATATACAAATAGAAGATATGGAAGTAGTACTGGAAGTTCATCAACAATAGCTCAGCATTTATCCATGAATCTTGGGTGTTTAAGGAAGATCGTTTCAGAGATGAAACACATGCATGCTCTAGAAGGAAATCATAATTGCGTTGTGGATATTATCAAAGCATTTGAAGATCCTAGATTTTCCAAATTATGCATGCATGTAGGAAGAACATATGCCATGGTACATGAGCATTCTCACTTGGCCTCTGATTTCGAGAGCGCTACAATGAGTGATTTGGTGGACTTCAATGATCTGAAATCATACTCATCTCAGATCTACACACCTGAAGATCTCATTAAATTTGTAGACAATGGTGTTGCAGAAGCTGAGCCATCTGTACTTCTTGTTGCTTGA 1458 0.3957 MGMNIKGEIERVNGKELSYSEFVERYMEKNKPVVLTGLMDPHNWRACTDWVTLHSQPNFQFFSTLFGASKVQVADCDTREFTDQKREEMLVSDFIARCLHLGEASAVQCNGETCASNGASVSVPYLKDWHFVKEYPEYVAYDTPRFFCDDWLNLYLDNFRTHIDSDTEQPNEEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCHLIFDRNMKNCVYNIFDEVSNSKFPGFSEAIWLECTQDAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFMSYFTLANLVLLRYTNRRYGSSTGSSSTIAQHLSMNLGCLRKIVSEMKHMHALEGNHNCVVDIIKAFEDPRFSKLCMHVGRTYAMVHEHSHLASDFESATMSDLVDFNDLKSYSSQIYTPEDLIKFVDNGVAEAEPSVLLVA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02103 485 Gene3D Cupin 2 288 - -
Phco7g02103 485 SMART cupin_9 146 304 IPR003347 -
Phco7g02103 485 Pfam Cupin-like domain 21 287 IPR041667 -
Phco7g02103 485 ProSiteProfiles JmjC domain profile. 132 304 IPR003347 -
Phco7g02103 485 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 8 352 - -
Phco7g02103 485 SUPERFAMILY Clavaminate synthase-like 6 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02103 Phco-Chr7 36918858 36922628 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phco7g02103 Cupin_8 2.8e-22 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02103 7 36918858 36922628 Phco7g02103 7 36918858 36922628 ECH