Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02085 ATGGGTCGTCATTCCTGTTGTTTAAAGCAAAAACTAAGGAAAGGTTTATGGTCCCCCGAAGAAGATGAGAAGCTATTCAATTACATAACCAGATTTGGCGTTGGCTGCTGGAGTTCTGTTCCCAAACAAGCTGGACTGCAAAGGTGTGGAAAGAGTTGCAGATTGAGATGGATAAACTACTTGAGGCCTGATTTAAAGAGAGGGATGTTCTCTCAACAAGAGGAGGATCTTATAATTAGCCTTCATGAAGTTCTAGGAAATAGGTGGGCTCAAATTGCAGCTCAATTACCTGGGAGAACAGATAATGAGATTAAGAACTTCTGGAATTCATGTTTGAAGAAGAAGCTAATGAAGCAAGGGATTGACCCTGCTACGCACAAGCCTATCCTCAGTGCTGAAGAGCACATAATAAAGGAAGAGAAGGACTCCATAGAGACACCGTCTATGCTATTACCAGTGTCTCATGGGATTTTAGTCTCCTCATCACAGGATTCACCACTTCTAGTGAACAATTTAAATTACTATGATGGTGTGTTCAATGTAACAGAAACTTCAAGGGAAGTTTTCATGAGCAAGAATGCATTGGACCCTTTGTCCTACTTTGAATTCCAAATGGGTTACAATTCAAGTGTGAACCCAATTAGACAGTTTGATCAGAACCAGGTGGGAACCAATTCGAGTTATGGATTCTCCTCATTGCCGTGTCTGAATAGTTCTGATCACCACGGGAACGTGTCGGTGGCAGAGTTTTCAGACAACAACTCAGCTTCTAAAATCAGTTCTTTGTTGAAGGAAAGTTCCAGCAATAGCTCAAGCATGAGTGTTTATCCAGGGGCGGGGTCTCAAATGATGGAAAATGCGGGGTTCTCATCATGGGAAGGTGAGAACAAAATTGATCCTTTGCTACAGTTTCAAGTCAATGTGGTAAAATCTGAAGAGTTCAAGACAAGTTCGTGGCAAGAAGGGCAGTTTCTGACTCAGAATTCCATTGATTTCACTACCTATCCGTTAATGTCACTGTCGGAGGATCTAACGGGAGCAAATTTTGATGTGTTCCAGCACATGTGA 1068 0.4204 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPILSAEEHIIKEEKDSIETPSMLLPVSHGILVSSSQDSPLLVNNLNYYDGVFNVTETSREVFMSKNALDPLSYFEFQMGYNSSVNPIRQFDQNQVGTNSSYGFSSLPCLNSSDHHGNVSVAEFSDNNSASKISSLLKESSSNSSSMSVYPGAGSQMMENAGFSSWEGENKIDPLLQFQVNVVKSEEFKTSSWQEGQFLTQNSIDFTTYPLMSLSEDLTGANFDVFQHM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02085 355 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phco7g02085 355 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco7g02085 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco7g02085 355 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco7g02085 355 CDD SANT 70 109 IPR001005 -
Phco7g02085 355 PANTHER MYB DOMAIN PROTEIN 55 1 283 - -
Phco7g02085 355 FunFam Myb transcription factor 11 67 - -
Phco7g02085 355 Gene3D - 11 67 - -
Phco7g02085 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phco7g02085 355 CDD SANT 17 61 IPR001005 -
Phco7g02085 355 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phco7g02085 355 SMART sant 66 114 IPR001005 -
Phco7g02085 355 SMART sant 13 63 IPR001005 -
Phco7g02085 355 FunFam Transcription factor MYB86 69 139 - -
Phco7g02085 355 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Phco7g02085 355 Gene3D - 69 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02085 Phco-Chr7 36488784 36490027 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g02085 Myb_DNA-binding 2e-13 CL0123