Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02071 ATGTTTAGTTTAGTTCTCTGTTACATGTCAGCATATCCATTCATTTCCTCTGCAAATCCGGCTTCTTCCAATGGCTCCCTTCTAGGAAGAAAAAGAACAAAAATGGAATCTGGAGTTAGGTTCTACTCAGTTGATGAGTTCAAATTGGACCCCAAATGGCTGATTGATCCTAAGCATCTCTTTGTCGGGCCACAGATTGGAGAGGGAGCTCATGCTAAAGTCTATGAGGGAAAATATAAAAACCAAACTGTTGCTATTAAAATTGTACACAAGGGAGAAACTGCGGATGATATCGCCAAGAGAGAAGGGGGTTTTGCTAGGGAGGTGGCAATGCTGTCTAGAGTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCTTGTAAGGAGCCAGTAATGGTGATAGTCACTGAGCTGCTATTAGGAGGAACATTGCGTAAGTATTTGCTTAACATGCGTCCCAAATGCTTGGATAGACATGTTGCCATTGGTTTTGCACTTGATATTGCACGTGCTATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTCAAACCTGATAACTTGCTGTTGACTGAAGACCAGAAAACAGTGAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCATTAACCGAGATGATGACTGCTGAAACAGGAACCTACCGCTGGATGGCTCCAGAGTTGTATAGTACTGTTACATTGAGGCAAGGGGAGAAAAAGCATTACAACCATAAAGTTGATGCTTATAGTTTTGCAATTGTGTTGTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAAGCCGCATATGCTGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTCTAATTCTTACTTCATGCTGGCAAGAGGACCCAAATGCCAGACCCAACTTCACCCAGATAATCCAAATGCTCCTAAATTATCTTTACACTGTTGCACCTCCTGAACCCATGATTCCTTCAAGAATATTCAGTTCTGAGAACACTGTCTTGCCGCCAGAGTCTCCCGGAACTAGCTCCTTAATGGCAAAACGTGATGACACAGGCGATACACCAAGAGCAAAGGACGAAGTCAAGCCTAATGGTTTTCTTTGCTGCTTTAGTCAGTGTTATTAA 1161 0.4307 MFSLVLCYMSAYPFISSANPASSNGSLLGRKRTKMESGVRFYSVDEFKLDPKWLIDPKHLFVGPQIGEGAHAKVYEGKYKNQTVAIKIVHKGETADDIAKREGGFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDRHVAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELALILTSCWQEDPNARPNFTQIIQMLLNYLYTVAPPEPMIPSRIFSSENTVLPPESPGTSSLMAKRDDTGDTPRAKDEVKPNGFLCCFSQCY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02071 386 CDD STKc_MAP3K-like 66 320 - -
Phco7g02071 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Phco7g02071 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 320 - -
Phco7g02071 386 Pfam Protein tyrosine and serine/threonine kinase 63 320 IPR001245 GO:0004672|GO:0006468
Phco7g02071 386 FunFam serine/threonine-protein kinase HT1 141 340 - -
Phco7g02071 386 ProSiteProfiles Protein kinase domain profile. 60 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02071 386 FunFam Kinase suppressor of Ras 1 49 139 - -
Phco7g02071 386 SMART serkin_6 60 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02071 386 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Phco7g02071 386 ProSitePatterns Protein kinases ATP-binding region signature. 66 87 IPR017441 GO:0005524
Phco7g02071 386 PRINTS Tyrosine kinase catalytic domain signature 291 313 IPR001245 GO:0004672|GO:0006468
Phco7g02071 386 PRINTS Tyrosine kinase catalytic domain signature 248 270 IPR001245 GO:0004672|GO:0006468
Phco7g02071 386 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Phco7g02071 386 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Phco7g02071 386 MobiDBLite consensus disorder prediction 344 360 - -
Phco7g02071 386 MobiDBLite consensus disorder prediction 344 370 - -
Phco7g02071 386 Gene3D Transferase(Phosphotransferase) domain 1 141 329 - -
Phco7g02071 386 SUPERFAMILY Protein kinase-like (PK-like) 52 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02071 Phco-Chr7 36149426 36153150 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco7g02071 PK_Tyr_Ser-Thr 1.1e-57 CL0016