Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02058 ATGCCGACGGATTCCTCCGAGCAAGACCTCGACGATCCTGACATCGAATTCGTCGAGGTTGATCCCTCTGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAATTGGAAGGCATTGAAGTGGCTTGGAATCAGATTAAGCTGGCGGATGTGTTGCGTAACTCTGAAGATTTGGAGCGACTTTATTCGGAGGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAACTCGTGGATTGACTCCAAGAGCGAGCACGTCAACTTCATTACTGAAATTTTCACCTCAGGAACGTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCAGTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTTTCTATCTTCACAGTAATAATCCTCCGATCATTCATCGTGACCTGAAGTGTGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTAAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGCAGGCCAATTCAGCTCATAGTGTCATAGGAACGCCGGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATACAACGAGCTTGTTGACATCTATGCTTTTGGTATGTGCTTGCTAGAGTTGGTAACAGTTGAGTATCCGTATGTTGAATGTGCCAATGCTGCCCAAATATACAAGAAAGTGACATCTGGAATAAAGCCTGCATCGTTGGCAAAAGTGATAGATCCTGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTCATGTATCTGAGCGGTTGTCTGCGAAGGACCTCTTGACGGATCCTTTCCTTCAGTCAGATTATGATAATGAAAGTGTAGGCCGATCTTCAAGATCTCAAACCCATCATTCAGGAAATGTTTCTCATAATCAAGTTGCTGTGGATACTTCTACTGAGGCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATGATAATACAATATTTTTAAAATTGAGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATATTGAAGCAGACACTTCAACGTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTTACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCTGAAATTCGGTATCACATTCCTAGTTGGAATGTCAGTGAAATTCCTGTTGACAGTTATAGTCAAGATTCAGGCTATACCTCTGAAAGTAAGCCAGAGGCCTCTCCTATGAAACTCGATTCCATTTCTTCTCCTGGCAGTCTCGCATTAGAAGTATTACCTTCAGGTCGAAAGTTCTGGTCGGACTCACCAAGGGGAGTTGGTGGAAACTCTCCATTTCGTGCTGGTAGTTCAAAATTTTGTTTTGCTGCAGATGCAAACGCTGAGGAAGGCAGCCTGGCCTCGAATGGTGATATTTCAGCAGATGATCGTGTTGGTGATTGTAGTGATGAGATTGTTGATTCCCCTTCCAGTGAGAGAAGTATTAAATCAGGAGCAACCAGTGAAAAAGGTCCTCTGAATGAAATATCTGGAAGCGTGAAAGATTCGGAAACAGAATACATCAATCTCATAGTAGCAAAACTGGAGAATTTGTTGGATAAACAAAGAGAGGAGTTAGATGAACTAAAGAAGAAGCACGAATTAGCTGTCTCAGATCTTTTGAAGGAACTTTCTCCAGAAATTAGCCAGAAGGTTCTAAATATATGCAACCTAGAGATGCCTGGCGGTGAAATGTAG 1788 0.4195 MPTDSSEQDLDDPDIEFVEVDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLADVLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWIDSKSEHVNFITEIFTSGTLRQYRKKHKHVDLRAVKKWSKQILEGLFYLHSNNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVIDPEVKAFIEKCIAHVSERLSAKDLLTDPFLQSDYDNESVGRSSRSQTHHSGNVSHNQVAVDTSTEASREFTVEGQRRDDNTIFLKLRIADSSGHIRNIHFPFDIEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRYHIPSWNVSEIPVDSYSQDSGYTSESKPEASPMKLDSISSPGSLALEVLPSGRKFWSDSPRGVGGNSPFRAGSSKFCFAADANAEEGSLASNGDISADDRVGDCSDEIVDSPSSERSIKSGATSEKGPLNEISGSVKDSETEYINLIVAKLENLLDKQREELDELKKKHELAVSDLLKELSPEISQKVLNICNLEMPGGEM 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02058 595 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02058 595 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Phco7g02058 595 MobiDBLite consensus disorder prediction 291 324 - -
Phco7g02058 595 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 496 - -
Phco7g02058 595 CDD STKc_WNK 25 285 - -
Phco7g02058 595 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 339 393 IPR024678 GO:0004674|GO:0005524
Phco7g02058 595 FunFam Probable serine/threonine-protein kinase WNK3 335 426 - -
Phco7g02058 595 Coils Coil 542 573 - -
Phco7g02058 595 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Phco7g02058 595 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Phco7g02058 595 MobiDBLite consensus disorder prediction 411 431 - -
Phco7g02058 595 Gene3D - 335 421 - -
Phco7g02058 595 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02058 595 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02058 595 MobiDBLite consensus disorder prediction 483 528 - -
Phco7g02058 595 MobiDBLite consensus disorder prediction 291 328 - -
Phco7g02058 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Phco7g02058 595 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Phco7g02058 595 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Phco7g02058 595 MobiDBLite consensus disorder prediction 508 528 - -
Phco7g02058 595 MobiDBLite consensus disorder prediction 493 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02058 Phco-Chr7 35966974 35970341 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco7g02058 Pkinase 4.8e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02058 7 35966974 35970341 Phco7g02058 7 35966974 35970341 ECH