Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02047 ATGGGTTACGAAGACAATCCGTGCGTTTCTGGTGATGAACCACGTTCTCCTGGTGATGCTCCTCAGGCAGAAAAAGGTGAAGAGGATTCAGAAATGAAGGATCTTTTTAAAATAGGGAAGAAAAGGAAGAGAAACGAGAGGAGTCCTGCTGAAATAACATTACTAGTGGAGAATGTCATGGCTGTGCTTGAGGTTACAGCCGAAGAGGATACTGATCTTAATAGACAGGAGAAACCTGCTATTAATAAACTGAAGAAGTTGCCTCTTCTCACAGAAGTCCTTTCCAAGAAACAACTCCAATTAGAGTTTTTAGATCATGGAGTTCTAAAATTGTTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGTTTGCCTAATATAAACATACGCACGGAAATCTTGAGGATTTTGAATGAGTTTCCTATAGACCTAGAGCAGTACGATAGGAGAGAACAACTGAAGAAGAGTGGCCTTGGAAAGGTGATTATGTTTTTATCAAAATCTCACGAAGAAAACAGGCTAAATAGAAAACTAGCCAAAGAGTTGGTTGACAAGTGGGGATAA 564 0.4007 MGYEDNPCVSGDEPRSPGDAPQAEKGEEDSEMKDLFKIGKKRKRNERSPAEITLLVENVMAVLEVTAEEDTDLNRQEKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLKLLKNWLEPLPDGSLPNINIRTEILRILNEFPIDLEQYDRREQLKKSGLGKVIMFLSKSHEENRLNRKLAKELVDKWG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02047 187 ProSiteProfiles TFIIS N-terminal domain profile. 110 187 IPR017923 -
Phco7g02047 187 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 48 187 IPR035441 -
Phco7g02047 187 Pfam TFIIS helical bundle-like domain 136 186 IPR017923 -
Phco7g02047 187 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 104 186 IPR035441 -
Phco7g02047 187 MobiDBLite consensus disorder prediction 1 32 - -
Phco7g02047 187 PANTHER PROTEIN IWS1 HOMOLOG 1 10 187 IPR044204 GO:0009742|GO:0032784
Phco7g02047 187 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02047 Phco-Chr7 35713304 35716432 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phco7g02047 Med26 1.7e-12 No_clan