Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02045 ATGGTCCACGTTTCGTTTTACAGGAACTATGGAAAGACGTTCAAGAAGCCTCGTCGTCCGTATGAGAAGGAGCGTCTGGACGCGGAGCTGAAGCTGGTGGGGGAGTACGGGCTGAGGTGCAAGAGGGAGCTGTGGAGGGTGCAGTACGCCCTCAGCCGCATCCGTAACAACGCGCGTAACCTCCTCACTCTCGATGAGAAGAACCCGCGCCGGATCTTTGAGGGCGAGGCTCTCCTCCGCCGCATGTTCCGCTACGGTCTCCTAGACGAGACACAGAACAAACTCGATTACGTCCTCGCACTCACTGTCGAGAACTTCCTAGAGCGTCGCCTCCAGACCCTAGTCTTCAAGTCCGGCATGGCCAAGTCCATCCACCATGCCAGGGTTCTCATCAAGCAGAGGCACATCAGGGTTGGTAGGCAAGTGGTGAACATCCCCTCTTTCTTGGTGAGGGTCGACTCACAGAAGCACATTGACTTTTCACTTACAAGTCCCCTTGGTGGAGGACGCCCTGGAAGAGTGAAGAGAAGGAACCAAAGGGCTGCTGCTAAGAAGGCAGCAGGTGGAGATGGAGATGAGGAAGACGAGGATTAG 594 0.5589 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARNLLTLDEKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGRQVVNIPSFLVRVDSQKHIDFSLTSPLGGGRPGRVKRRNQRAAAKKAAGGDGDEEDED 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02045 197 Pfam Ribosomal protein S4/S9 N-terminal domain 8 108 IPR001912 GO:0019843
Phco7g02045 197 MobiDBLite consensus disorder prediction 163 197 - -
Phco7g02045 197 ProSiteProfiles S4 RNA-binding domain profile. 109 183 - -
Phco7g02045 197 Pfam S4 domain 109 152 IPR002942 GO:0003723
Phco7g02045 197 NCBIfam 30S ribosomal protein S4 11 166 IPR005710 GO:0003735|GO:0006412|GO:0015935
Phco7g02045 197 Gene3D - 108 164 IPR036986 GO:0003723
Phco7g02045 197 SMART s4_6 109 180 IPR002942 GO:0003723
Phco7g02045 197 ProSitePatterns Ribosomal protein S4 signature. 107 131 IPR018079 GO:0019843
Phco7g02045 197 PANTHER 30S 40S RIBOSOMAL PROTEIN 7 183 IPR022801 GO:0003735|GO:0015935|GO:0019843
Phco7g02045 197 CDD S4 109 153 - -
Phco7g02045 197 SUPERFAMILY Alpha-L RNA-binding motif 12 158 - -
Phco7g02045 197 FunFam 40S ribosomal protein S9 108 188 - -
Phco7g02045 197 SMART Ribosomal_S4_2 8 108 IPR001912 GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02045 Phco-Chr7 35650323 35651611 Dispersed/Transposed