Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02027 ATGGTTGTGAAAACTGGGTTATTTGTTTTTTCAGTGTTTTTGTTCTTAATCTCCATCGACGCCAAGCTTGAACTCTACCCAGAAGATTTTAAGGCACTCTTGACTCTGAGAAAGGACCTCGGAGTCAACGGTGAACTGGAGGCAAATGAGGCATGTTACTCGGAGGGTGTGTTCTGCGAGCGAAGGCTCTCGACCAAGGAAACCTACGTGCTCCGAATCACGAGGTTGGTGCTGAAATCCAAGCATCTCAACGGTGTCTTGTCCCCCGCAATAGGACGCCTCACGGAGCTCAAACAACTGTCTCTCTCCCACAACCAACTCGTTGACCGCCTCCCTCCCCAAATCGTTGACTGCCGCAAGCTCGAATTCCTTGACCTCTCCAACAACCTCTTCTCCGGCGAGGTCCCGTCCGAACTCTCCTCTCTCACGCGCCTCCGCACGTTGGACATCTCCTCCAACAAACTGTCCGGCAACCTCAACTTCCTCAAGTACTTCCCCAACCTCGAAACCCTCTCCGTCGCCGACAACTTCTTCACCGGAAGGGTGCCTTCTTCCGTCCGCTCCTTCCGCAACCTCCGCCAATTCAACTTCTCCGGCAACAGCTTCCTCGAACCCTCTCTTCGCTTCCAACATTCCTCCTCGTCAGACACCATTCTCTCCAGACGTTACCTTTTGGACGGTGGTGATGCACCTTCTCCTGCTCCTGACTCTAACGAGAGAAACTCTCAAACTTCCCATGATTCCCCTACAGCGGCACCTGATCCTTCCCCTAACCACCGAAAACACAAGCACAGTAAGAGAAAACTCGCGGGGTGGATTCTCGGGTTTGTGGCAGGGGCACTGGCGGGAACCTTATCAGGGTTCGTGTTTTCTCTGTTGTTCAAGCTGGCTTTGGCGTTGATCAAAGGAAGAGGAAAGAGAGCGGGTCCTGATATTTTTAGTCCCTTGATTAAGAAAGCAGAGGATTTGGCCTTCTTGGAGAAAGAAGAAGGGCTCGCTTCGATGGAAATCATTGGACGCGGTGGCTGTGGAGAGGTTTACAAGGCTGAGTTACCAGGAAGCAATGGCAAAATGATTGCTATAAAGAAAGTGATTCAACCTCCCAAAGATGCTGCTGAATTGGCAGAGGAAGATAGTAAGATTATGCATAAGAAAATGAGGCAAATTCGGTCTGAGATTACAACTGTGGGACAGATTAGACACCGAAACCTTCTGCCTCTGTTAGCGCATGTTTCTAGGCCTGATTGCCACTACCTAGTCTATGAATTCATGAAAAATGGTAGCTTGTTGGACTTGCTGGACAAGGTTGAAAAGGGTGAGGAAGAGTTGGATTGGTTGGCGAGGCATAGAATCATGCTTGGTGTTGCTGCTGGACTTGAATACCTTCACATTAGTCACAACCCTCGCATCATTCATAGGGATCTCAAGCCTGGAAATATTCTTCTCGATGATGACATGGAAGCGCGCATAGCTGATTTTGGACTCGCTAAGGCAATGCCGGATTATAAGACTCACATAACCACCTCCAATGTTGCTGGCACTGTGGGGTACATTGCTCCTGAGTATCACCAGATACTTAAGTTCACTGATAAGTGTGATATCTACAGCTTTGGGGTTATCCTTGGGGTGTTGGTGATTGGGAAGCTTCCTTCCGATGAGTTCTTTCAGCATACTGAAGAGATGAGTTTGGTCAAGTGGTTGAGGAAGGTTTTGAGTTCTGAGAATCCCAAGGAGGCTATTGATACGAAGCTGCTCGGAAATGGGTATGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCATGCTTTTGCACCATGGATGATCCCAAGGAGAGGCCTAACAGCAAGGATGTTAGGTGCATGCTGTCTCAGATCAACCACTGA 1881 0.4902 MVVKTGLFVFSVFLFLISIDAKLELYPEDFKALLTLRKDLGVNGELEANEACYSEGVFCERRLSTKETYVLRITRLVLKSKHLNGVLSPAIGRLTELKQLSLSHNQLVDRLPPQIVDCRKLEFLDLSNNLFSGEVPSELSSLTRLRTLDISSNKLSGNLNFLKYFPNLETLSVADNFFTGRVPSSVRSFRNLRQFNFSGNSFLEPSLRFQHSSSSDTILSRRYLLDGGDAPSPAPDSNERNSQTSHDSPTAAPDPSPNHRKHKHSKRKLAGWILGFVAGALAGTLSGFVFSLLFKLALALIKGRGKRAGPDIFSPLIKKAEDLAFLEKEEGLASMEIIGRGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELAEEDSKIMHKKMRQIRSEITTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLLDLLDKVEKGEEELDWLARHRIMLGVAAGLEYLHISHNPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEMSLVKWLRKVLSSENPKEAIDTKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQINH 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02027 626 ProSiteProfiles Protein kinase domain profile. 332 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02027 626 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Phco7g02027 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Phco7g02027 626 Gene3D Ribonuclease Inhibitor 26 227 IPR032675 -
Phco7g02027 626 MobiDBLite consensus disorder prediction 235 252 - -
Phco7g02027 626 Pfam Protein kinase domain 335 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02027 626 Gene3D Phosphorylase Kinase; domain 1 322 423 - -
Phco7g02027 626 Gene3D Transferase(Phosphotransferase) domain 1 424 625 - -
Phco7g02027 626 FunFam Leucine-rich repeat receptor-like protein kinase 424 626 - -
Phco7g02027 626 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 319 423 - -
Phco7g02027 626 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Phco7g02027 626 SUPERFAMILY RNI-like 72 470 - -
Phco7g02027 626 MobiDBLite consensus disorder prediction 229 264 - -
Phco7g02027 626 FunFam Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 140 224 - -
Phco7g02027 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 624 - -
Phco7g02027 626 SMART serkin_6 332 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02027 Phco-Chr7 34930988 34932868 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Phco7g02027 Pkinase 1.9e-42 CL0016