Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02021 ATGCACCTTGAGAGTAGTCACATATGCGGGTTCACTTCTAAACTAGTAGAAAACGACAATTTTGCATCGTCACTGTCTATTACTCCATCTTCACTGGTTTCCTTATATATAACCACCGTCTTCTTCCTTCTATATGCCCTCAAACCAAAACCTGCTTCAATCACTACCCAACATATGGATGCCCCAACCCTCCTCTTTTCCGAACCCGATCTCTATTTACAAACTCCCGCTGGCAACCGCATTCCAGCGCACGCTACCATTCTGGCTTCCGCATCCCCGGTTCTACAAAACGTCATAACATCCTCCAACCGAATCGTTAAAATCCACGGCGTTCCAGATGCCGCCGTCACGGCCTTCGTAGCGTTCCTCTACTCCGCCAGATGCACGGAGGAAGATATGGACAAGTACGGAATGCACCTTCTGGCACTGTCGCACGTGTACATGGTGAAGCAGCTGAAGCGGCGGTGCATCAAAGGACTGGGCGACCGCGCCAGTACGGAGAACGTAGTGGACGTGTTGCAACTGGCGCGGCTCTGCGACGCACCGGATCTCTACCTCAAGTGCGTCAAGCACCTCACTAACCATTTCAAAGCGGTGAAGGAAACCGAGGGATGGAGATTCTTGCAGAACCACGACCCCTGCCTTGAACTTGAGATTCTCCGATTCATGGAAGAAGATGAAAAGAGAAAGAGGAAGACGAGGAAGAGGAGGGAGGATGGAAGGTTGTACACGGAACTGAGCGAGGCGATGGTATGTTTGGAGCACATATGCACGGAGGGGTGCACGGAGGTAGGGCCGGTTGATGTGGAGGTTGGGCGAGGGAGAGAACCGTGCTCAAAGTTCGGCACGTGTCAGGGTCTGCAAAATTTGATTCGACACTTTGTGACCTGCGAGAGGGTTAAGGGACGGTGTTTGCGGTGTTTGCGGTGTAAGCGTATGTGGCAACTCTTCAAACTCCACTCCTCCATTTGCCTGCGACACGATTCCTGCAAGGTTCCTCTCTGCAGGAAAATTAGATTAAAAATGGAGGAAGAGAACAAGAAAGGTGACGCAAGGTGGGAAGTACTAGTGAGAAAGGTGGCCTCTGCCAAAGCCATGTCTTTCTTGGCACTGCCAAAGAGGAAGAGGGTTGAGGAAATTAGTGGAGAGGGACAATAA 1158 0.5112 MHLESSHICGFTSKLVENDNFASSLSITPSSLVSLYITTVFFLLYALKPKPASITTQHMDAPTLLFSEPDLYLQTPAGNRIPAHATILASASPVLQNVITSSNRIVKIHGVPDAAVTAFVAFLYSARCTEEDMDKYGMHLLALSHVYMVKQLKRRCIKGLGDRASTENVVDVLQLARLCDAPDLYLKCVKHLTNHFKAVKETEGWRFLQNHDPCLELEILRFMEEDEKRKRKTRKRREDGRLYTELSEAMVCLEHICTEGCTEVGPVDVEVGRGREPCSKFGTCQGLQNLIRHFVTCERVKGRCLRCLRCKRMWQLFKLHSSICLRHDSCKVPLCRKIRLKMEEENKKGDARWEVLVRKVASAKAMSFLALPKRKRVEEISGEGQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02021 385 ProSiteProfiles BTB domain profile. 69 132 IPR000210 GO:0005515
Phco7g02021 385 SUPERFAMILY POZ domain 70 194 IPR011333 -
Phco7g02021 385 Pfam BTB/POZ domain 69 158 IPR000210 GO:0005515
Phco7g02021 385 SUPERFAMILY TAZ domain 240 343 IPR035898 -
Phco7g02021 385 SMART TAZ_2 240 336 IPR000197 -
Phco7g02021 385 FunFam BTB/POZ and TAZ domain-containing protein 2 165 235 - -
Phco7g02021 385 FunFam BTB/POZ and TAZ domain-containing protein 2 237 365 - -
Phco7g02021 385 CDD BACK 165 208 - -
Phco7g02021 385 Gene3D TAZ domain 237 371 IPR035898 -
Phco7g02021 385 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 56 376 IPR044513 -
Phco7g02021 385 Pfam TAZ zinc finger 247 335 IPR000197 -
Phco7g02021 385 Gene3D Potassium Channel Kv1.1; Chain A 63 159 IPR011333 -
Phco7g02021 385 Gene3D - 164 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02021 Phco-Chr7 34738834 34741271 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Phco7g02021 BTB 2.5e-08 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02021 7 34738834 34741271 Phco7g02021 7 34738834 34741271 ECH