Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01989 ATGGGAGTTCCCTTCGCCAGGGGTCTGAGCGGGGTAAACGCAACAGCCGCCGTTAGCATCTGCACTACAATGGCGAAGCAGCAGAGCCACGACGTCGTTTCCGATCTGATCGACTTCCTTAACGCTTCTCCAACGGCTTTCCACGCCGTCGATGTGGCGAAGGAGCGTTTGCAGAGCGCGGGCTTCCAACAACTTTCCGAGAGGGAACTGTGGGAACTGCAACCTGGCAACAAGTACTTCTTCACCAGAAACCACTCCACCATTGTTGCATTCGCCATCGGCAAAAAGTATGTTGCTGGAAATGGATTCTACATAATCGGGGCTCACACGGATAGTCCATGTCTCAAACTCAAGCCAGTCTCCAAGGTGGTTAAGGGTGGGATTTTGGAGGTAGGTGTTCAAATCTATGGAGGTGGTTTGTGGCACACTTGGTTTGACCGAGACTTGACTGTGGCGGGAAGGGTCATTGTTCGAAAAGAGAATGCGGGTTCTGTTTCATACTCACATCACCTTGTTAGAATTGAGGAACCTATAATGCGGATCCCAACTTTGGCAATTCACTTGGACAGGACTGTTTCTGATGGATTCAAATTTAACAATGAGACGCACCTTATTCCCATCTTGGCAACAGCGCTCAAGGGTGAGCTTAATAAATTGTCCTCAGAAAATGGTCTGGTTGAAAATGGAAATCAGACTGATGCAAAGAAAGCAACCGATAAAACAGGCACTGCTAATTCAAAGCACCACCTTCTTCTTTTGCAGTTGCTTGCAAGTAAGCTTGGGTGTGAGACAGATGACATTTATGATTTTGAATTGCAAGCTTGTGATACACAACCAAGTACTGTTGGTGGTGCTGCAAAGGAATTCATTTTTTCAGGACGACTTGATAACCTCTGCATGTCATTTTGCTCACTGAAGGCTTTAATAGATGCTACATCCTCTGAAAGCAGTCTTGAGGAAGAGACAGGAGTTAGAATGGTGGCTTTATTTGACCATGAGGAAGTTGGATCCAGCTCTGCACAAGGAGCTGGCTCTCCTGTTATGCTAAATGCTGTGACTAGGGTTACCAATTCTTTTGGCACAAAGCCCAACCTTCTGGAGAAAGCAGCACAAAGAAGTTACCTTGTATCTGCTGATATGGCACATGCACTACACCCAAATTACATGGAGAAGCATGAAGCAAACCATCAGCCCAAACTACACGGAGGACTTGTCATTAAAAACAATGCAAACCAGCGCTATGCAACCAATATTGTCACATCCTTCTTATTCAGGGAAATAGCATCAAAACATAACCTTCCCGTTCAGGACTTTGTGGTTCGCAATGACATGTCTTGTGGTTCAACCATTGGTCCTATTCTTGCGAGTGGGGTAGGTATCCGCACCGTCGATGTTGGTGCACCACAGTTGTCAATGCATAGCATAAGAGAAATTTGTGCTGTTGATGATGTGAAGTATTCATATGAGCACTTCAAGGCCTTTTACCAAGAATTCTCTCATCTCGATGGTAAGATGGTCGTGGACATATAG 1530 0.4575 MGVPFARGLSGVNATAAVSICTTMAKQQSHDVVSDLIDFLNASPTAFHAVDVAKERLQSAGFQQLSERELWELQPGNKYFFTRNHSTIVAFAIGKKYVAGNGFYIIGAHTDSPCLKLKPVSKVVKGGILEVGVQIYGGGLWHTWFDRDLTVAGRVIVRKENAGSVSYSHHLVRIEEPIMRIPTLAIHLDRTVSDGFKFNNETHLIPILATALKGELNKLSSENGLVENGNQTDAKKATDKTGTANSKHHLLLLQLLASKLGCETDDIYDFELQACDTQPSTVGGAAKEFIFSGRLDNLCMSFCSLKALIDATSSESSLEEETGVRMVALFDHEEVGSSSAQGAGSPVMLNAVTRVTNSFGTKPNLLEKAAQRSYLVSADMAHALHPNYMEKHEANHQPKLHGGLVIKNNANQRYATNIVTSFLFREIASKHNLPVQDFVVRNDMSCGSTIGPILASGVGIRTVDVGAPQLSMHSIREICAVDDVKYSYEHFKAFYQEFSHLDGKMVVDI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01989 509 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 103 119 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 136 156 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 462 477 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 330 348 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 373 389 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 FunFam Aspartyl aminopeptidase 1 114 279 - -
Phco7g01989 509 Gene3D Zn peptidases 35 495 - -
Phco7g01989 509 CDD M18_DAP 35 496 - -
Phco7g01989 509 PANTHER ASPARTYL AMINOPEPTIDASE 25 508 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 Pfam Aminopeptidase I zinc metalloprotease (M18) 39 495 IPR001948 GO:0004177|GO:0006508|GO:0008270
Phco7g01989 509 SUPERFAMILY Aminopeptidase/glucanase lid domain 115 273 - -
Phco7g01989 509 Gene3D Aminopeptidase i, Domain 2 114 279 IPR023358 GO:0004177
Phco7g01989 509 SUPERFAMILY Zn-dependent exopeptidases 21 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01989 Phco-Chr7 33917421 33932946 Dispersed