Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01984 ATGGGGTTTCATGACTTTGTTTTGCTATTCTGTTCAATTTGGTGTGTCTTTTTTGTGGGTAGTTGCAGTGCTCAGTTGCAGTCCTCTCAGACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATCTCTTCTTCTGGGCAAGTGAATGTCACATGCAAAGACAATTTTGTCACTGAACTCTCCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGGTTTGCCATTCCTAATCAAACACTATCAGATATCTTCTCCATGGACTCTTTTGTGGCTACTCTGGCAAGGTTAACTGGTCTGAGAGTCCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTGCCTGATAGATTTCACAGACTTTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGTACCATCCCAAATTTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCTCTTTAAAAGACATTGACATGTCAAGCAATCAAATATCAGGGATCCTGCAAGATTTTAGTGCTTTGAGTAGTTTGGAACAGCTAGATTTAAGAGAAAACAAATTAGAGTCTTTCCTGCCAGCAATGCCAAAAGGGTTGATTAGTCTTTTCCTCAGCAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACGGGCTTCGGAAGCTAGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTTTGCCGAACATCAGTTACTTGAATTTGGCTTCCAACTTGTTGAATGGACCACTGCAAAGTCACCTAAGATGTAGCAGCCAACTTATATTTGTTGACATATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCACTGAGCACTAGATCAGAAACTAGAGTTGTTATGAGTGATGGAAACTGTTTATCTGGGAGTGCGCAGCATCAGCATGCAGTATCCTACTGCACAGAACCTCATGTGAAGAAGAAATCATATAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAATTCTTTTAATCTCTGTGGTTTTGGCTTTGGCCATTGTTATAACTTGTAAGAAGTTCTTCCTTCGAGGTGTGTCAGAGAAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTACGCGCCAGGGTTCTCCTCTGAGCTTGTAACAAATGCAAGGTATATTTCCGAAACTGCCAAGTTAGGCAGAGAAGACCTCCCCACATGTAGGTCGTATTCTTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGATAACTCTACTTTTGTGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTTGAGAGTGGGATACAGATTGTAATAAGGTCCCTGCCTGTGTCAAAAAAGTATTCAATTAGAAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTCCTAGGTCACTGCATTGATGGTGTTGTGGGAGAGAATAATGAGACAAATGTCTTTCTCATTTATGAATATGTGCCAAATGGGACTTTTCAAACTTATCTCTCTGGAGATAGTCCTGGCAAGGTTTTCAAATGGTCAGAGCGATTGTCAGTACTGATTAACATTGCTAAGGCTGTGCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACCAACAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAGCTGATGCATGTGGGGTAAAAGGAGAAAGTCCTAATTCGTGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTGGAGGCACTGGTTGGACCTTCAGTATCAGCTAAAAGAGAAGCAGTTGTGCTGAATGTAATGGCATCTTTCAATAGTGAGGATGGTTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTCCTCAAAAGAATCTCTTTTTGTTGTGATTTCCATAACAAATAAATGTATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGATGTCCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGCTGATGGGGATCACAGAATTTGA 2292 0.4097 MGFHDFVLLFCSIWCVFFVGSCSAQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELSILGDKPTKGRDFDGFAIPNQTLSDIFSMDSFVATLARLTGLRVLSLVSLGMWGPLPDRFHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPNLFNSSSNLSVLSLRNNRLKGPFPPSILSVTSLKDIDMSSNQISGILQDFSALSSLEQLDLRENKLESFLPAMPKGLISLFLSRNSFSGEIPKRYGQLNGLRKLDVSFNALTGTAPAELFSLPNISYLNLASNLLNGPLQSHLRCSSQLIFVDISYNRLVGDLPSSLSTRSETRVVMSDGNCLSGSAQHQHAVSYCTEPHVKKKSYRVGIFVGVIVGILLISVVLALAIVITCKKFFLRGVSEKHLLHKTVQDSSYAPGFSSELVTNARYISETAKLGREDLPTCRSYSLEELKEATNNFDNSTFVGENIYGKLYRGKLESGIQIVIRSLPVSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNETNVFLIYEYVPNGTFQTYLSGDSPGKVFKWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEEADACGVKGESPNSWQMKMLEDDVYSFGFILLEALVGPSVSAKREAVVLNVMASFNSEDGWKQIVDPVVQATSSKESLFVVISITNKCISPESWNRPSIEDVLWNLQYASQIQATADGDHRI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01984 763 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Phco7g01984 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 566 763 - -
Phco7g01984 763 Pfam Protein tyrosine and serine/threonine kinase 489 744 IPR001245 GO:0004672|GO:0006468
Phco7g01984 763 Gene3D Phosphorylase Kinase; domain 1 447 565 - -
Phco7g01984 763 ProSiteProfiles Protein kinase domain profile. 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01984 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 384 - -
Phco7g01984 763 Gene3D Ribonuclease Inhibitor 260 392 IPR032675 -
Phco7g01984 763 Gene3D Transferase(Phosphotransferase) domain 1 566 761 - -
Phco7g01984 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 258 - -
Phco7g01984 763 SUPERFAMILY Protein kinase-like (PK-like) 466 748 IPR011009 -
Phco7g01984 763 SUPERFAMILY L domain-like 29 370 - -
Phco7g01984 763 SMART LRR_typ_2 141 165 IPR003591 -
Phco7g01984 763 SMART LRR_typ_2 213 235 IPR003591 -
Phco7g01984 763 SMART LRR_typ_2 281 305 IPR003591 -
Phco7g01984 763 SMART LRR_typ_2 236 259 IPR003591 -
Phco7g01984 763 PANTHER UNNAMED PRODUCT 110 678 - -
Phco7g01984 763 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Phco7g01984 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 446 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01984 Phco-Chr7 33718592 33722963 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phco7g01984 PK_Tyr_Ser-Thr 3.5e-20 CL0016