Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01958 ATGGAGAACAGCCAGCAAGGGGGCCAAGGCCAATCGGGACCCTACCCCGGTGCGGCGGCCGGAAGTGCAGGTGCAGGTGCAGGAGCGCCCCCCTTCCAGCACCTCCTCCACCAGCAGCAGCAGCAGCTTCAGATGTTCTGGTCCTACCAGCGCCAAGAGATCGAGCACGTCAACGACTTCAAGAACCACCAGCTACCCCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAGGCCCCAATCCTCTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTTGTTGACATCGTCCCTCGCGACGAGATCAAGGACGACGCTGCGCTCGTTGGGGCCACTGCTAGTGGTGTGCCCTACTACTACCCTCCCATTGGCCAGCCTGCCGGCATGATGATTGGCCGTCCTGCCGTTGATCCTGCCACCGGAGTCTACGTTCAGCCCCCGTCCCAGGCCTGGCAGTCAGTCTGGCAGTCTGCTGCCGACGACGCGTCCTACGGTGGCGCCGGCGGAGCCGGTGCCCAAGGGAGCATTGATGGCCAGAGCTGA 672 0.6369 MENSQQGGQGQSGPYPGAAAGSAGAGAGAPPFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSAADDASYGGAGGAGAQGSIDGQS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01958 223 MobiDBLite consensus disorder prediction 1 31 - -
Phco7g01958 223 FunFam Nuclear transcription factor Y subunit gamma 33 142 - -
Phco7g01958 223 Pfam Core histone H2A/H2B/H3/H4 53 127 IPR007125 GO:0003677
Phco7g01958 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 157 - -
Phco7g01958 223 Gene3D Histone, subunit A 31 142 IPR009072 GO:0046982
Phco7g01958 223 SUPERFAMILY Histone-fold 39 136 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01958 Phco-Chr7 32959896 32965118 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco7g01958 CBFD_NFYB_HMF 2.2e-17 CL0012