Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01947 ATGGAGAAACACCAAGTGATGCTCCCTACCGCATCTACATCATCAATAGCTTTATCATCTCATTTTAAACATGTTCAGAAAGAGGTTTTAATATTTCAAATGAAGGAGATATCATCTCAGAACCAAAGTGACAAGGAAGTTAAGCAGCACCGATATGCATTTCAAACTACGAGTCCTATTGATGTTCTGGATGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTTAAAAACAACAGTTTCCCAAGAAGTTACTACAGGTGTGTTTATCCAGAGTGCAATGTTAAAAAACAAATCCAGCGCCATTCCGAAGATGAACAAGTCGTGGTCACAACCTACGAAGGGACACATACACACCCTGTGGATAAGTCAGCAGAAACCTTCAACCAGATCTTGGACAACTTTCTCCCAGGCAACCTACTCAATAATGCGCCTCCCACATTAGAATAG 453 0.404 MEKHQVMLPTASTSSIALSSHFKHVQKEVLIFQMKEISSQNQSDKEVKQHRYAFQTTSPIDVLDDGYQWRKYGKKIVKNNSFPRSYYRCVYPECNVKKQIQRHSEDEQVVVTTYEGTHTHPVDKSAETFNQILDNFLPGNLLNNAPPTLE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01947 150 SMART WRKY_cls 63 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01947 150 SUPERFAMILY WRKY DNA-binding domain 55 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01947 150 ProSiteProfiles WRKY domain profile. 58 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01947 150 Gene3D WRKY domain 38 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01947 150 Pfam WRKY DNA -binding domain 64 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01947 150 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 126 IPR044810 GO:0003700
Phco7g01947 150 FunFam WRKY transcription factor 57 49 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01947 Phco-Chr7 31302242 31303016 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g01947 WRKY 3.2e-25 CL0274