Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01941 ATGGCAAAAGAGCAGCAAAAGCAGGATCCCGGGGCTTTCACCAACTCTTTGCAAAACCAAAACCAGGAATTGCAGGGTAAAGGTGAAGTGGTAAAGGAGGAGGCTGAGGCCCCTTTCACTCTCAGCGTCACTTCCAAGGTTTTGTACATGTTGGGAGACATCACAGCAGGGCCTGCGTCTATGTTTACGCAATGGCTCCGATTAGTTCGTAAACGCACTTCCAATTATCGCACTTCTGGCTTCCCTCACCGTTCTTCCACCATGCCTTCTAGCCCGAGAGAATCTATAGAGGATGTGAAAAATGATCAGCAAACAGAAACTAGTTTGTGGGAGAGACTTGGTAAAGCTGAAATGTTGGACATTGAATCGAGCTCATTTTCTTGGGACAGACTCTCTTCGCTTCACCACATTGAACACACTAGCAGCAACGAACATTCTGAGGATGAAATGAACAGAGCTCTTGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAATGGTCGTGGGAGTGGTGATACTTGTCCAAAACAAGAAACAGCTGTTATAAAGATATCATCTTCAAGAATGGCAACACAATCCGAACGTCTTGGTTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGCTAGAGTCATCCACAATACCAGTTTGGAGTGGATACAAATAAAGGAAGCTACAGAAAAAGCAAGAGATGTCGCAGGTTCTGCAGGTGATGAAATTGGTGAACTGACATGCACAGAACTTCTGGAAGCACTTGATCTTAGCCGATGTCTCATGCTTATGAGTTATGTGCATGGTTCATCCTCGCTTGAAAGCTCTAGAGCATTTGAGTCAGAATATGCAGAACGAACATCAGCAGCTCTTGGCAGAGTACTGATGCTGGATCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGACAGCTTAGATGGCGAGGGAACTCTGCAAATTTGTTATTGACTGAAAAAGTAATCTCTGCAAGTGTGGATACAATAGGAGAAACCTTTAATTCTGCGGAGACCCCATACGGACCAAGGGTGAGTAGGGAACTTCAAAAAGACAAAAGGTCAACATCAGTTGGTAGTAGAATGAATGTATCACAATACTCTGGTGTTTCTGACATCAAATGCACATCAATACCCCACAATTTGAACTTGAAAATTCAAACATCAGGAGAATCAATGCCAATTGACTTTAACATTGTGGCAATTGATTCTGGCGTACCCCGTCGACCCCCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTTCTTAATAGCTCTGAGTTTTCCTCTAACCTATTACATGATATAACTGGAGGGAGGTTAGGATGTCCTCATCTAGAAGACACTAACACAACAACCGATGTTCACATAGATGATGTAGCATCACTAGTTCATGAGTTCCGTAATGGTTTTCGTGCTGCTCTCATGGACATGCAGGGATTCCATATATTCTTACTCACACTTCATCAAAAACTTGATAATTTGTTAAGGGTATTTATGAATGCTGTAGGCAAAGTATCATCTGGAGAGTCTGAAAAGGAGGATGCAGTGGTTCATGACTTACCTTCACCGGCTTTTTCTGGTAGTTGTCTTTCCCCATCTATTAAAGAGAAACATTCTAATGATATTCATCAAGATTGCAGTGATTCAGAATCACAGAGAACTGCTCCAAGGGCATCATCATCTTCAGGCATTAGAGATTGCTGTGACTCTGCCTCTCCTGCGTCAAGAGAAGGTTGGCATGGAAAGCACTCTAAAGGAAGCGCGGAGTCACTTCGTGGTCTGCGCTTGACAACTAAGCTTCGTGACTTACATAAATTTGCTAAGGTTGACTCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCAGTCAAGTTATGCTTGGAGAACAATTTTAACACAGGATTTTTTGAGGGTAGTGATAACAACACTGTTGTTGATGCATATGAACTCAAGGTCAGACTCGAGCATATTCTTGAGAGAATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCAGTTACAAATAGTCTGTTCATCGGTGGAGCACTGGCTGCAAGATCTACATACACACTGCAACGCTTGGGAATCACACATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAGTTTCCTGATCTATTCACGTACAAAAATTTCTCTGTGTGTGACAATGAAGATTCTAACATCAGCTGCATATTTGAAGAGGCTTGTGATTTTATCGATTATGTTGAGAAAGCTGGTCAGAGTGTTTTAGTTCATTGCTTTGAGGGTAAAAGCAGAAGTGCCACTTTGGTCCTTGCTTTCCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAGCAAGTTCATCGTCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTACTTGAACTAGACCAGAAACTGCATGGTAAGGTTTCAATGGAGTGGCAGCAACGGAAACCAATGATGAAAATTTGTCCCATCTGTGGCAAGAATGCTGGACTAAGTAGTAGCTCACTTAAACTCCACCTTCAAAAATCACACAAAAAGTTGTCATCAGGAAGTGTTGATAGTGCCATGACAATGGAGATCCAGAAGGCATTAACAACTTTGAAGATTAGCCGTGGTGGGAGTGTTAGTCCCACACAGAGACACTCTCATTCAATGGTTGATGCATAG 2766 0.4219 MAKEQQKQDPGAFTNSLQNQNQELQGKGEVVKEEAEAPFTLSVTSKVLYMLGDITAGPASMFTQWLRLVRKRTSNYRTSGFPHRSSTMPSSPRESIEDVKNDQQTETSLWERLGKAEMLDIESSSFSWDRLSSLHHIEHTSSNEHSEDEMNRALEVTVNSGGVVFFAFFNGRGSGDTCPKQETAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWIQIKEATEKARDVAGSAGDEIGELTCTELLEALDLSRCLMLMSYVHGSSSLESSRAFESEYAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLTEKVISASVDTIGETFNSAETPYGPRVSRELQKDKRSTSVGSRMNVSQYSGVSDIKCTSIPHNLNLKIQTSGESMPIDFNIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGCPHLEDTNTTTDVHIDDVASLVHEFRNGFRAALMDMQGFHIFLLTLHQKLDNLLRVFMNAVGKVSSGESEKEDAVVHDLPSPAFSGSCLSPSIKEKHSNDIHQDCSDSESQRTAPRASSSSGIRDCCDSASPASREGWHGKHSKGSAESLRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNDAVKLCLENNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSAVTNSLFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDNEDSNISCIFEEACDFIDYVEKAGQSVLVHCFEGKSRSATLVLAFLMLRKKFTLLEAWNALKQVHRRSQPNDGFAKILLELDQKLHGKVSMEWQQRKPMMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTTLKISRGGSVSPTQRHSHSMVDA 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01941 921 SUPERFAMILY Protein kinase-like (PK-like) 64 427 IPR011009 -
Phco7g01941 921 Gene3D Protein tyrosine phosphatase superfamily 677 849 IPR029021 -
Phco7g01941 921 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 694 839 IPR029021 -
Phco7g01941 921 ProSiteProfiles Dual specificity protein phosphatase domain profile. 694 839 IPR020422 GO:0006470|GO:0008138
Phco7g01941 921 Pfam Actin-fragmin kinase, catalytic 106 349 IPR015275 -
Phco7g01941 921 MobiDBLite consensus disorder prediction 567 584 - -
Phco7g01941 921 MobiDBLite consensus disorder prediction 77 102 - -
Phco7g01941 921 CDD DSP 695 832 - -
Phco7g01941 921 MobiDBLite consensus disorder prediction 556 603 - -
Phco7g01941 921 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 763 815 IPR000387 GO:0016311|GO:0016791
Phco7g01941 921 Gene3D - 275 416 IPR036940 -
Phco7g01941 921 MobiDBLite consensus disorder prediction 346 369 - -
Phco7g01941 921 MobiDBLite consensus disorder prediction 8 26 - -
Phco7g01941 921 Pfam Dual specificity phosphatase, catalytic domain 708 835 IPR000340 GO:0008138|GO:0016311
Phco7g01941 921 FunFam Dual specificity protein phosphatase PHS1 666 840 - -
Phco7g01941 921 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 920 IPR035010 GO:0004721|GO:0009737|GO:0043622
Phco7g01941 921 SMART dsp_5 694 836 IPR020422 GO:0006470|GO:0008138
Phco7g01941 921 ProSitePatterns Tyrosine specific protein phosphatases active site. 781 791 IPR016130 GO:0016311|GO:0016791
Phco7g01941 921 MobiDBLite consensus disorder prediction 77 94 - -
Phco7g01941 921 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01941 Phco-Chr7 30549006 30555353 Wgd