Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01939 ATGGCCCACTTGAAGCTAGCGTGGAAAGGTTTGTGGCCCCAATGGGGAAGATGTGGCTCCTTGGAGTCTAGCATTCCTACTCTTCCCGTTTGTGAAACCATGAAGTGGACAACATGGAAGTCCAACACCATGATAATGGCTGTGGTGTTCCTTTATCTGAGTTTTTCCTTGGAGGTGCTCTGTCACCCCTCTCATGCAGACAGAATTTATGAGCTTCCTGGCCAACCCTACGTAGGCTTTCAACAGTTCTCAGGATATGTCACAGTGGATGACAAGAAACACAAGTCTCTCTTTTACTATTTTGCTGAGTCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGAGCATTCTCAGAAAATGGACCCTTCAGGCCAAATGGAGAATTTCTGATTAAAAATGAGTATAGTTGGAACAAAGAGGCAAACATGCTGTATTTAGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCATATATGACAGTGAATGACGAGGCAACAGCCAGGGACAATCTTGTATTCCTGCTACGCTGGTTCAACAAGTTCCCCCAATACAGGAGCAGAGATTTGTTTCTAACGGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATGATTAAAATGAACATAAGGAAAAAGATATTCAATCTGAAAGGCATTGCGTTGGGTAATCCAGTTCTAGAATATGCCACCGACTTCAATTCAAGAGCTGAGTTCTTCTGGTCTCATGGGCTAATATCAGATTCAACCTACAACATATTCACCACAGTGTGCAACTATTCTAGGTACGTGAGTGAGTACTACAGGGACTCGATTTCGCCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAGAGAAACTAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAATGTTATTTCTCCCAAAACCCAAGAAGCAAGTGAGAGTATAGATGTTTGTGTGGATGATAAGGTTACAAACTACTTAAACCGGAGAGATGTACAAGAGGCACTTCATGCAAAGCTCATTGGAGTTCGGAAGTGGGATGTTTGCAGCAACGTACTCAACTATGATATGCTCAACCTGGAAGTGCCTACACTACCTGTTGTTGGATCACTGATAAAAGCTGGAGTTAGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGGAAGACAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAACAGGTTGGCGGATGGACTCAAGTTCATGGCAATACCCTCTCATTTGCGACTGTGAGAGGTGCCTCCCATGAAGTTCCTTTCTCACAACCTCAAAGATCACTTGTACTATTCCAGTCATTCTTGAAAGGCATATCTTTACCTGAAGTCTTCTGA 1503 0.4345 MAHLKLAWKGLWPQWGRCGSLESSIPTLPVCETMKWTTWKSNTMIMAVVFLYLSFSLEVLCHPSHADRIYELPGQPYVGFQQFSGYVTVDDKKHKSLFYYFAESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLLRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLMIKMNIRKKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNIFTTVCNYSRYVSEYYRDSISPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSNVISPKTQEASESIDVCVDDKVTNYLNRRDVQEALHAKLIGVRKWDVCSNVLNYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLGRQLGLNTTVPYRVWFEGQQVGGWTQVHGNTLSFATVRGASHEVPFSQPQRSLVLFQSFLKGISLPEVF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01939 500 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Phco7g01939 500 ProSitePatterns Serine carboxypeptidases, serine active site. 210 217 IPR018202 GO:0004185
Phco7g01939 500 Gene3D - 348 384 - -
Phco7g01939 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 67 480 IPR001563 GO:0004185|GO:0006508
Phco7g01939 500 Gene3D alpha/beta hydrolase 64 325 IPR029058 -
Phco7g01939 500 SUPERFAMILY alpha/beta-Hydrolases 70 496 IPR029058 -
Phco7g01939 500 Gene3D - 394 493 - -
Phco7g01939 500 FunFam Carboxypeptidase 62 497 - -
Phco7g01939 500 Pfam Serine carboxypeptidase 74 493 IPR001563 GO:0004185|GO:0006508
Phco7g01939 500 FunFam Carboxypeptidase 394 493 - -
Phco7g01939 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 159 IPR001563 GO:0004185|GO:0006508
Phco7g01939 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 196 221 IPR001563 GO:0004185|GO:0006508
Phco7g01939 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 170 IPR001563 GO:0004185|GO:0006508
Phco7g01939 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01939 Phco-Chr7 30430255 30435235 Dispersed/Transposed