Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01898 ATGGATCCGGACGCCTTCACCGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCCGCCGCACCGCCTCCTCGCCCCCCGCCGCCTCTCCTTGACTATGCCGTTGCCCCGCCCCCCGTCGCCCCGGCTTACCACCCCGCCAGGGCTGCTCCCCGCGAACTCGGCGGCCTCGAGGAGCTCTTCCAGGCCTACGGCATCCGCTACTACACGGCGGCCAAGATCGCCGAGCTCGGCTTCACCGTGAGCACGCTGGTCGACATGAAGGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGACCTCCTCGTCGGCGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAAAGACGTCGCATCGACGACGACGAGATCAAACGCCGCAATAGCAACCTCCTCTCCACCGACACCACCACCAACGCCCTCGATGCCCTCTCTCAGGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCGGCGGAGGAGAGGAGGAAGCAGCAGAGGAGACGGAGGACGAGGATGAAGGCGAATCTTCAGCAGGAGGAGAACGAGGATGTTGAAGATGAGGAGGGAGAAGAGAACGAGGAAGGGAACAACAACAGTGGTGGAGGTTGTGAGAGGCAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAACGGGTTGGACTATCTGTTTCACCTCTACGAGCAGTGCCGTGAGTTCTTGATGCAAGTTCAGGCCATCGCGAAGGACCGCGGTGAAAAGTGCCCCACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAAGCTGGAGCAAGCTACATCAACAAGCCAAAGATGCGACACTACGTCCACTGCTACGCCTTACATTGTCTCGACGAGGATGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCATGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGACATTGATGCCATATTCAACGCGCACCCTCGTCTTTCCATTTGGTACGTTCCGACGAAGCTCCGTCAGCTTTGTCACGCGGAGAGGAACAGCGCCGCTGCTTCGAGCTCCGTGTCTGTGGGCAGCGCCCACCTTCCCTTCTAG 1212 0.6048 MDPDAFTASLFKWDPRTVLPAAPPPRPPPPLLDYAVAPPPVAPAYHPARAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDDEIKRRNSNLLSTDTTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVVAAEERRKQQRRRRTRMKANLQQEENEDVEDEEGEENEEGNNNSGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVGSAHLPF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01898 403 Gene3D Protein LEAFY 226 395 IPR038276 -
Phco7g01898 403 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 224 389 IPR035209 GO:0003677
Phco7g01898 403 MobiDBLite consensus disorder prediction 153 231 - -
Phco7g01898 403 PANTHER PROTEIN LEAFY 1 402 IPR002910 GO:0003677|GO:0006355
Phco7g01898 403 Coils Coil 180 219 - -
Phco7g01898 403 MobiDBLite consensus disorder prediction 205 219 - -
Phco7g01898 403 Pfam Floricaula / Leafy protein SAM domain 54 131 IPR035079 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Phco7g01898 C_LFY_FLO 4.2e-109 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01898 7 22702364 22704630 Phco7g01898 7 22702364 22704630 ECH