Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01855 ATGTCAATAATCACCTTTGTTTGCTTTCTCATTCCCACGCAGAGGCTATATAATACGTACGCAAGCATTCATTCTTTCATGTGCCTGTCACCACCATCACCAACTTCATACACAAAACTTAACCCAATGGAAAGGCTAAATTTTATCAAAAATGGAGTGAGTAGTTTGCCTCCAGGTTTTCGTTTCCAGCCAACAGATGAAGAGCTTGTGTTTCAGTACTTGAAATGTAAGATCTTCTCCTGCCAGTTGCCTGCTTCAATCATTCCTGAGATCAATGTCAGCAAGTATGATCCCTGGGATTTGCCAGGAAATTGTGATGATGAACAAGAGAGGTACTTTTTCAGCTCCAAAGAGGCCAAATATCGAAACGGAAATCGTATGAACCGAACAACAAACTCTGGCTATTGGAAGGCAACGGGATCAGACAAAAAGGTTTCATCGTCAATAAATAATGGCATTGCCGGGTTGAGAAAGACTCTTATATTTTATGAAGGAAAATCTCCAAACGGCTCCAGAACTGAATGGCTCATGCATGAATATCGACTCCTCTGTGTGGAAACTAGTGCTTCCAAATCAATCCAGGAGATAGGGGATTGGGTTCTGTGTCGCATATTCATCAAGAAAAGAAGCATAGAAAGTGATAACAACACTCCTCCCAGGCAGAAGAATGCAGCGACGAATAATGTTGAGGTGGCTGAGCCAAGATTCTTCGAGTTTTTTAGTGTTCATCACAATTCAGTTCCCGCTCCTATACATTCTTCTATACTCTCATCTTGTTCAAGTTCCAATAACGTTGAAGAGGTCTCTTCTCCTAACCACGAACAAACAAGCGACTAG 837 0.4158 MSIITFVCFLIPTQRLYNTYASIHSFMCLSPPSPTSYTKLNPMERLNFIKNGVSSLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVSKYDPWDLPGNCDDEQERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKVSSSINNGIAGLRKTLIFYEGKSPNGSRTEWLMHEYRLLCVETSASKSIQEIGDWVLCRIFIKKRSIESDNNTPPRQKNAATNNVEVAEPRFFEFFSVHHNSVPAPIHSSILSSCSSSNNVEEVSSPNHEQTSD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01855 278 Pfam No apical meristem (NAM) protein 57 182 IPR003441 GO:0003677|GO:0006355
Phco7g01855 278 SUPERFAMILY NAC domain 52 207 IPR036093 GO:0003677|GO:0006355
Phco7g01855 278 Gene3D NAC domain 65 212 IPR036093 GO:0003677|GO:0006355
Phco7g01855 278 ProSiteProfiles NAC domain profile. 56 207 IPR003441 GO:0003677|GO:0006355
Phco7g01855 278 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 55 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01855 Phco-Chr7 20512289 20513666 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g01855 NAM 2.5e-33 No_clan