Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01823 ATGGGTAGATCTCCTTGTTGTGAGAAGGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTACATCAAACTCCATGGTGAAGGCTGTTGGAGATCCCTCCCCAAAGCTGCTGGCTTGCTCAGATGTGGCAAGAGTTGCAGACTCAGATGGATAAATTACCTCAGACCTGATCTAAAGAGAGGCAACTTCACTGAAGATGAAGACGAACTCATCATTAACCTCCACAGCTTACTAGGAAACAAATGGTCTTTGATTGCCGCAAGGTTACCGGGAAGAACCGATAACGAAATCAAAAACTATTGGAACACTCACATCAAGCGGAAACTCTACAGCCGCGGAATCGACCCGCAAACCCATCGACCACTCAACGCCGCCTCCGCCACTCCGGCAACCGCCCCGGTTCCGCCTCCCTCCCCCGCCGCTGTCCCTGTGGCAACGTCGTCATCCAACAAAAAAATAAACAGCGACACCATTAGCAGCTCCAACACGCTCACCCATGATGTTGTTATTACCAACAACAGTAACAACAGCAACGGTTCTCAGTTGGTGAGCAATAGTGCTTATGCCAACACCGCAACGAAGGTTGGAACCGATGAAGATTCTAACAGCAGCAGCGGCGTTACCGTGGAAGAATCCTTCCCTCACCATCAACTCAACTTGGACCTTTCCATTGGCCTTCCCTCTTCTCACCAAGTTTCTTCTTCGGTGAACCCAGAAAAGTTGAAAGCGCAAGAGCACGATCAAAAACCGCATGTGTTGTACAAGTGGTATGGGAACATTACTGGCCAAGCTGTTTGTCTTTGTTACAGTCTAGGGCTTCAAAGCGACCAAGCTTGTTATTGCAAAGGCGTGGGTGCTACTGCTACCACTACCATGGTTACTACAACTGCCACAGATAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG 957 0.4817 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAASATPATAPVPPPSPAAVPVATSSSNKKINSDTISSSNTLTHDVVITNNSNNSNGSQLVSNSAYANTATKVGTDEDSNSSSGVTVEESFPHHQLNLDLSIGLPSSHQVSSSVNPEKLKAQEHDQKPHVLYKWYGNITGQAVCLCYSLGLQSDQACYCKGVGATATTTMVTTTATDSNLYRFYRPMNI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01823 318 FunFam Myb transcription factor 68 137 - -
Phco7g01823 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco7g01823 318 CDD SANT 69 112 IPR001005 -
Phco7g01823 318 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phco7g01823 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco7g01823 318 CDD SANT 16 61 IPR001005 -
Phco7g01823 318 MobiDBLite consensus disorder prediction 150 166 - -
Phco7g01823 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco7g01823 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phco7g01823 318 MobiDBLite consensus disorder prediction 122 166 - -
Phco7g01823 318 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Phco7g01823 318 Gene3D - 14 66 - -
Phco7g01823 318 FunFam MYB-related transcription factor 13 66 - -
Phco7g01823 318 SMART sant 13 63 IPR001005 -
Phco7g01823 318 SMART sant 66 114 IPR001005 -
Phco7g01823 318 Gene3D - 68 135 - -
Phco7g01823 318 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 229 - -
Phco7g01823 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01823 Phco-Chr7 19120301 19121559 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g01823 Myb_DNA-binding 4.7e-15 CL0123